del print

gustaveroussy · May 14, 2021 · 3e0986a · 3e0986a
1 parent cf77427
commit 3e0986a
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Showing 3 changed files with 0 additions and 7 deletions.
diff --git a/Snakefile b/Snakefile
@@ -636,7 +636,6 @@ if "Int_Adding_ADT" in STEPS:
         dic_INT_ADD_ADT_INFO[INT_ADD_ADT_OUTPUT[i]]['INT_ADD_ADT_INPUT_RDA'] = INT_ADD_ADT_INPUT_RDA[i]
         dic_INT_ADD_ADT_INFO[INT_ADD_ADT_OUTPUT[i]]['INT_ADD_ADT_INPUT_DIR_ADT'] = INT_ADD_ADT_INPUT_DIR_ADT[i]
         dic_INT_ADD_ADT_INFO[INT_ADD_ADT_OUTPUT[i]]['INT_ADD_ADT_SAMPLE_NAME_ADT'] = INT_ADD_ADT_SAMPLE_NAME_ADT[i]
-        sys.stderr.write(INT_ADD_ADT_OUTPUT[i] + str("\n"))
 
 if "Int_Adding_TCR" in STEPS:
     ### Sample/Project
@@ -821,7 +820,6 @@ if "Grp_Adding_ADT" in STEPS:
         dic_GRP_ADD_ADT_INFO[GRP_ADD_ADT_OUTPUT[i]]['GRP_ADD_ADT_INPUT_RDA'] = GRP_ADD_ADT_INPUT_RDA[i]
         dic_GRP_ADD_ADT_INFO[GRP_ADD_ADT_OUTPUT[i]]['GRP_ADD_ADT_INPUT_DIR_ADT'] = GRP_ADD_ADT_INPUT_DIR_ADT[i]
         dic_GRP_ADD_ADT_INFO[GRP_ADD_ADT_OUTPUT[i]]['GRP_ADD_ADT_SAMPLE_NAME_ADT'] = GRP_ADD_ADT_SAMPLE_NAME_ADT[i]
-        sys.stderr.write(GRP_ADD_ADT_OUTPUT[i] + str("\n"))
 
 if "Grp_Adding_TCR" in STEPS:
     ### Sample/Project

diff --git a/rules/Grp_Adding_ADT.smk b/rules/Grp_Adding_ADT.smk
@@ -11,7 +11,6 @@ wildcard_constraints:
 This function allows to determine the input .rda ge file and kallisto adt folder.
 """
 def grp_add_adt_input(wildcards):
-    sys.stderr.write(str(wildcards.grp_add_adt_output)+"\n")
     ge_rda_file = dic_GRP_ADD_ADT_INFO[wildcards.grp_add_adt_output]['GRP_ADD_ADT_INPUT_RDA']
     kallisto_folder = list(dict.fromkeys(dic_GRP_ADD_ADT_INFO[wildcards.grp_add_adt_output]['GRP_ADD_ADT_INPUT_DIR_ADT'].split(",")))
     kallisto_folder.insert(0,ge_rda_file)

diff --git a/rules/Rule_all.smk b/rules/Rule_all.smk
@@ -129,9 +129,5 @@ def get_targets(STEPS):
         targets["Grp_Adding_BCR"]=[
         expand("{grp_add_bcr_output}_BCR.rda", grp_add_bcr_output = GRP_ADD_BCR_OUTPUT)
         ]
-    for s in targets["Grp_Adding_ADT"]:
-        sys.stderr.write(str(s)+"\n")
-    for s in GRP_ADD_ADT_OUTPUT:
-        sys.stderr.write(str(s)+"\n")
 
     return targets