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added more logging
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vladimir2217 committed Dec 6, 2024
1 parent 9c1f03c commit 072676b
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion dags/annotate_and_index.py
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@

from airflow.models import DAG
from airflow.operators.empty import EmptyOperator
from roger.tasks import default_args, create_pipeline_taskgroup
from roger.tasks import default_args, create_pipeline_taskgroup, logger

env_enabled_datasets = os.getenv(
"ROGER_DUG__INPUTS_DATA__SETS", "topmed,anvil").split(",")
Expand All @@ -30,6 +30,8 @@
init = EmptyOperator(task_id="init", dag=dag)
finish = EmptyOperator(task_id="finish", dag=dag)

logger.info(f"annotate_and_index params >>> {dag.params}")
logger.info(f"annotate_and_index default_args >>> {dag.default_args}")
from roger import pipelines
from roger.config import config
envspec = os.getenv("ROGER_DUG__INPUTS_DATA__SETS","topmed:v2.0")
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