journal-scrapers

Journal scraper definitions for the ContentMine framework.

This repo is a collection of ScraperJSON definitions targetting academic journals. They can be used to extract and download data from URLs of journal articles, such as:

• Title, author list, date
• Figures and their captions
• Fulltext PDF, HTML, XML, RDF
• Supplementary materials
• Reference lists

ScraperJSON definitions

Scrapers are defined in JSON, using a schema called ScraperJSON which is currently evolving.

The current schema is described below.

There can be two keys in the root object:

• url - a string-form regular expression specifying which URL(s) this scraper targets
• elements - a dictionary of elements to scrape

Elements are defined as key-value pairs, where the key is a description of the element, and the value is a dictionary of specifiers defining the element and its processing. Allowed keys in the specifier dictionary are:

• selector - an XPath selector targetting the element to be selected.
• attribute - a string specifying the attribute to extract from the selected element. Optional (omitting this key is equivalent to giving it a value of text). In addition to html attributes there are two special attributes allowed:
  • text - extracts any plaintext inside the selected element
  • html - extracts the inner HTML of the selected element
• download - a boolean flag: true if the element is a URL to a resource that must be downloaded. Optional (omitting this key is equivalent to giving it a value of false).

Example:

{
  "url": "plos.*\\.org",
  "elements": {
    "fulltext_pdf": {
      "selector": "//meta[@name='citation_pdf_url']",
      "attribute": "content",
      "download": true
    },
    "title": {
      "selector": "//meta[@name='citation_title']"
    }
  }
}

Usage

Currently these definitions can be used with the quickscrape tool.