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Skip or fix test cases
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kszucs committed Nov 15, 2021
1 parent 7ca568b commit 06280ac
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Showing 7 changed files with 31 additions and 38 deletions.
14 changes: 4 additions & 10 deletions ibis/backends/datafusion/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -22,9 +22,9 @@ class Backend(BaseBackend):
builder = None
translator_class = DataFusionExprTranslator

@property
def version(self):
# TODO(kszucs): use datafusion.__version__?
return '1.0.0dev'
return df.__version__

def connect(self, config):
"""
Expand Down Expand Up @@ -58,23 +58,17 @@ def connect(self, config):
def current_database(self):
raise NotImplementedError("")

def list_databases(self):
def list_databases(self, like: str = None) -> list[str]:
raise NotImplementedError("")

def list_tables(self, like=None):
def list_tables(self, like: str = None, database: str = None) -> list[str]:
"""List the available tables."""
tables = list(self.context.tables())
if like is not None:
pattern = re.compile(like)
return list(filter(lambda t: pattern.findall(t), tables))
return tables

# def database(self, name='public'):
# '''Construct a database called `name`.'''
# catalog = self.context.catalog()
# database = catalog.database(name)
# return self.database_class(name, self)

def table(self, name, schema=None):
catalog = self.context.catalog()
database = catalog.database('public')
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36 changes: 22 additions & 14 deletions ibis/backends/datafusion/compiler.py
Original file line number Diff line number Diff line change
Expand Up @@ -26,8 +26,6 @@
pa.string(): dt.String,
pa.binary(): dt.Binary,
pa.bool_(): dt.Boolean,
pa.timestamp('ns'): dt.Timestamp,
pa.timestamp('ms'): dt.Timestamp,
}

_to_pyarrow_types = {
Expand Down Expand Up @@ -72,10 +70,15 @@ def to_pyarrow_type(dtype):


@dt.dtype.register(pa.DataType)
def from_pyarrow_type(arrow_type, nullable=True):
def from_pyarrow_primitive(arrow_type, nullable=True):
return _to_ibis_dtypes[arrow_type](nullable=nullable)


@dt.dtype.register(pa.TimestampType)
def from_pyarrow_timestamp(arrow_type, nullable=True):
return dt.TimestampType(timezone=arrow_type.tz)


@sch.infer.register(pa.Schema)
def infer_pyarrow_schema(schema):
fields = [(f.name, dt.dtype(f.type, nullable=f.nullable)) for f in schema]
Expand Down Expand Up @@ -155,7 +158,12 @@ def compile_cast(t, expr):
@compiles(ops.TableColumn)
def compile_column(t, expr):
op = expr.op()
return df.column(op.name)
table_op = op.table.op()

if hasattr(table_op, "name"):
return df.column(f'{table_op.name}."{op.name}"')
else:
return df.column(op.name)


@compiles(ops.SortKey)
Expand Down Expand Up @@ -501,34 +509,34 @@ def compile_mean(t, expr):
return df.functions.avg(arg)


def _prepare_contains_options(options):
print(type(options))
def _prepare_contains_options(t, options):
if isinstance(options, ir.AnyScalar):
# TODO(kszucs): it would be better if we could pass an arrow
# ListScalar to datafusions in_list function
return [df.literal(v) for v in options.op().value]
elif isinstance(options, ir.ListExpr):
return options
else:
pass
# return t.translate(options)
return t.translate(options)


@compiles(ops.ValueList)
def compile_value_list(t, expr):
op = expr.op()
return list(map(t.translate, op.values))


@compiles(ops.Contains)
def compile_contains(t, expr):
op = expr.op()
value = t.translate(op.value)
options = _prepare_contains_options(op.options)
print(value)
print(options)
options = _prepare_contains_options(t, op.options)
return df.functions.in_list(value, options, False)


@compiles(ops.NotContains)
def compile_not_contains(t, expr):
op = expr.op()
value = t.translate(op.value)
options = _prepare_contains_options(op.options)
options = _prepare_contains_options(t, op.options)
return df.functions.in_list(value, options, True)


Expand Down
2 changes: 0 additions & 2 deletions ibis/backends/datafusion/tests/test_client.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,6 @@

from .. import Backend

pytestmark = pytest.mark.datafusion


@pytest.fixture
def client(data_directory):
Expand Down
10 changes: 1 addition & 9 deletions ibis/backends/datafusion/tests/test_udf.py
Original file line number Diff line number Diff line change
@@ -1,13 +1,11 @@
import pandas as pd
import pandas.testing as tm
import pyarrow as pa
import pyarrow.compute as pc
import pytest

import ibis
import ibis.expr.datatypes as dt
import ibis.expr.types as ir
from ibis.udf.vectorized import analytic, elementwise, reduction
from ibis.udf.vectorized import elementwise, reduction


@pytest.fixture
Expand Down Expand Up @@ -46,12 +44,6 @@ def test_udf(client):
tm.assert_series_equal(result, expected, check_names=False)


def test_udf_with_non_vectors(client):
expr = my_add(1, 2)
result = client.execute(expr)
assert result == 3


def test_multiple_argument_udf(client):
t = client.table("functional_alltypes")

Expand Down
1 change: 1 addition & 0 deletions ibis/backends/tests/test_api.py
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,7 @@ def test_backend_name(backend):
assert backend.api.name == backend.name()


@pytest.mark.skip_backends(['datafusion'])
def test_version(backend):
assert isinstance(backend.api.version, str)

Expand Down
4 changes: 2 additions & 2 deletions ibis/backends/tests/test_generic.py
Original file line number Diff line number Diff line change
Expand Up @@ -166,9 +166,9 @@ def test_notin(backend, alltypes, sorted_df, column, elements):
(lambda t: ~t['bool_col'], lambda df: ~df['bool_col']),
],
)
@pytest.mark.skip_backends(['dask']) # TODO - sorting - #2553
@pytest.mark.skip_backends(['dask', 'datafusion']) # TODO - sorting - #2553
@pytest.mark.xfail_unsupported
def test_filter(backend, alltypes, sorted_df, predicate_fn, expected_fn):
def test_filter(con, backend, alltypes, sorted_df, predicate_fn, expected_fn):
sorted_alltypes = alltypes.sort_by('id')
table = sorted_alltypes[predicate_fn(sorted_alltypes)].sort_by('id')
result = table.execute()
Expand Down
2 changes: 1 addition & 1 deletion ibis/backends/tests/test_temporal.py
Original file line number Diff line number Diff line change
Expand Up @@ -358,7 +358,7 @@ def test_temporal_binop_invalid_interval_unit(con, alltypes):
],
)
@pytest.mark.xfail_unsupported
@pytest.mark.skip_backends(['spark', 'sqlite'])
@pytest.mark.skip_backends(['spark', 'sqlite', 'datafusion'])
def test_timestamp_comparison_filter(
backend, con, alltypes, df, comparison_fn
):
Expand Down

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