GitHub - imgag/umiVar_legacy: cfDNA variant caller as implemented by Fran

This repository will not be updated anymore. Please use the updated repository umiVar

Name		Name	Last commit message	Last commit date
Latest commit History 26 Commits
Beta_parameters		Beta_parameters
Somatic_caller_new.v2		Somatic_caller_new.v2
test		test
utils		utils
Barcode_group_distribution.R		Barcode_group_distribution.R
Combine_functions_step1.R		Combine_functions_step1.R
INSTALL.md		INSTALL.md
Parameters_step1.R		Parameters_step1.R
Plot_error_rate_22_11_2018.R		Plot_error_rate_22_11_2018.R
README.md		README.md
TSV2VCF.py		TSV2VCF.py
VariantCalling.docx		VariantCalling.docx
argparse.bash		argparse.bash
cfdna_caller.py		cfdna_caller.py
cfdna_caller.sh		cfdna_caller.sh
env.yml		env.yml
pileup2tsv.py		pileup2tsv.py
split_bam.py		split_bam.py

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