PEP8 fixes #1031
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PEP8 fixes #1031
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Alexsandruss
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Pahandrovich and
vlad-nazarov
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samir-nasibli
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Aug 17, 2022
napetrov
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Feb 25, 2023
* ENH: OneDAL python ifaces for Random Forest * initial pybinds * update python wrappers, test * update init * misc tests update * update + tests * intro import * update sample weights * sklearnex dispather: cls * bump up version * update fixed params for bins * update backend wrappers * update RF cl * update onedal rf classifier fit * update fallback to base * update constraints for falback * update some attributes saving * fallback when n_outputs is not 1 * revert additions to deselected_tests.yaml * update esimators_ for cl * enabled using onedal rf regression * PEP8 fixes (#1031) * Added shape attr check in validation (#1014) Co-authored-by: Aleksandr Pivovar <apivovar@Aleksandrs-MacBook-Pro.local> * Fix binary AUC calculation for boolean labels (#1030) * Fix binary AUC calculation when labels are bool. Converting y_score to int using label_binarizer just like y_true. * Optional binarization for y_score Co-authored-by: Alexander Andreev <alexander.andreev@intel.com> * Update dependency numpy [SECURITY] (#946) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Update dependency nbconvert to v6.5.1 [SECURITY] (#1037) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Update algorithm wrappers to latest Scikit-learn changes (#1032) * Update algorithm wrappers to latest sklearn changes * PEP8 and lasso fixes * Fix pca versioning * Update KMeans versioning * Rewrite kmeans.fit versions branching * Fix TSNE perplexity to pass parameter check (perplexity < n_samples) * Future warnings fix * Restore auto kmeans algorithm for compatibility with sklearn<1.1 * Numpy versions change; in-function imports removal; load_boston removal (#1041) * Bump up `dal` and `dal-devel` version to 2021.6.0 in conda recipe (#1015) * Bump up `dal` and `dal-devel` version to 2021.6.0 in conda recipe * Update meta.yaml * Code owners update (#1039) * Update of code owners * Replace DTClassifier with DTRegressor in RFRegressor (#1052) * allow n_init param in KMeans to accept str 'auto' (#1045) * allow n_init param to accept in kmeans * whitespace removed * whitespace removed * removed check for string for param n_init in kmeans * changed param 'algorithm' default to lloyd * whitespace * add versioning for param change * pep8 fix * pep8 fix * pep8 fix * Fixed typo: sklern to sklearn in README.md (#1047) * fixed typo, sklern to sklearn Co-authored-by: Alexander Andreev <alexander.andreev@intel.com> * Update dependency jupyter-core to v4.11.2 [SECURITY] (#1056) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * ENH: multi-gpu enable * CI updates (#1062) * Fix mpich headers for macOS * Update Ubuntu version to 22.04 * Update macos version to 12 * Change numpy version (#1057) * Change 'host' to 'cpu' in sycl_execution_content (#1064) * Change 'host' to 'cpu' in sycl_execution_content * Remove deprecated host device * Update python version to 3.10 * Revert "Update python version to 3.10" This reverts commit 9bf55d4. Co-authored-by: Samir Nasibli <samir.nasibli@intel.com> * Fix for n_iter_ SVM attribute and oneDAL kNN classifier result option (#1071) * Add workaround for n_iter_ SVM attribute * Pytest onedal dir * Exclude test_policy * fix result_option fail for kneighbors method in knn classifier * Numpy version fix (#1070) * Downgrade build version and set test version of numpy * Upgrade version to 1.20 for python<=3.9 * Set base numpy to be 1.19.* for build * Set numpy for future python version * Enabling full versions and >=3.10 python Co-authored-by: Nikolay Petrov <nikolay.a.petrov@intel.com> * System info output in CI (#1073) * add system info * fix python activation on win * add system descriptor * fix descriptor calls * fix descriptor calls 2 * fix cpufeature installation on mac * change system descriptor url to oneapi-src/onedal * Add descriptor script * Remove extra variable * Update dependency certifi to v2022 [SECURITY] (#1079) Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> * Fix for balanced class weight (#1080) * add balanced branch of _compute_class_weight * Remove extra computation of weights * Migration to new compiler for 2023.0 release (#1059) * link libonedal_dpc.so with libonedal_sycl.a due to mkl depency issue * only changing linker if linux * additional condition for windows linkage * removing multiply defined symbols * windows build completes, sycl errors, trying to start job * builds and 86/100 examples pass, cleaned up previous unnecessary additions * initial fix for Linux DPCPP failure * Flake8 appliance * add env variables for Linux DPCPP * Linux DPCPP ci update * Linux DPCPP check: update conda build step * moved compiler options setting into conda-recipe build * reverting linkage changes - resolved from mkl fpk update * address some comments updates passing -fsycl flag some refactoring * rebase * fix comments * Update CMakeLists.txt fix using gcc compiler * Apply pep8 * Apply pep8 n2 * Update CMakeLists.txt * resolving windows intel compiler issues * MD to MT flag for compiler and removing unneeded cmake verbose flag * updated gitignore * link libonedal_dpc.so with libonedal_sycl.a due to mkl depency issue * only changing linker if linux * additional condition for windows linkage * removing multiply defined symbols * windows build completes, sycl errors, trying to start job * builds and 86/100 examples pass, cleaned up previous unnecessary additions * initial fix for Linux DPCPP failure * Flake8 appliance * add env variables for Linux DPCPP * Linux DPCPP ci update * Linux DPCPP check: update conda build step * moved compiler options setting into conda-recipe build * reverting linkage changes - resolved from mkl fpk update * address some comments updates passing -fsycl flag some refactoring * rebase * fix comments * Update CMakeLists.txt fix using gcc compiler * Apply pep8 * Apply pep8 n2 * Update CMakeLists.txt * resolving windows intel compiler issues * MD to MT flag for compiler and removing unneeded cmake verbose flag * updated gitignore * Update setup.py * reverting MT flag back to MD * undoing last commit * reverting sycl linking addition * removing sycl addition pt. 2 * addressing Mac comments * link fsycl in cmake only when using dpc interface * FIX: daal4py spmd test * some misc fixes setup.py Co-authored-by: Samir Nasibli <samir.nasibli@intel.com> Co-authored-by: Alexander Andreev <alexander.andreev@intel.com> * FIX: daal4py sycl examples (#1081) Added required extra_link_args for `icpx/icx` compiler. * CI matrix and sklearn>1.1 fixes (#1086) * fix for 'normalize' deprecation in linear_model * Add initial jobs matrix * Rework matrix * Dependencies fix * Disable DPCPPROOT; fix clang-format installation * Modify sklearn dep * Modify scikit-learn installation with pip * Disable df examples/tests * fix for sed command * Fix scipy version on Windows * Fix scipy version on Windows 2 * Build docs only on py3.9 * Build docs only on py3.9 n2 * Build docs only on py3.9 n3 * Select one job for docs generation * Increase testing numpy version on Windows * Extend matrix to sklearn 1.2 * PCA n_features_ deprecation * Update linear model __init__ * Correct daal version with fixed decision forest * Move docs building to separate job * Change matrix; update deps; add sklearnex/* tests * Enable onedal iface * Temp.disable dpcpp * Update pybind11 for py311 * Add upgrade for testing deps installation * Add sourcing of MSVS on Windows * Update setup*.py * Correct requirements.txt * Correct conda-recipe/build* - d4p installation * Modify Windows testing * Fix paths for Windows testing * Fix paths for Windows testing 2 * Repair docs job * Repair docs job 2 * Repair docs job 3 * Enable older dpcpp compiler build * Try to fix deselect for daal4py/sklearn tests on Windows * fix daal4py docs build - tbb runtime libs exception * Try to fix deselect for daal4py/sklearn tests on Windows 2 * change dpcpp compiler * Change dep. versions * CI matrix change * Add global patching testing on lnx; remove extra exmples run on mac * Explicit passing of gamma paramater for kmeans (#1091) * Revert record filenames in conda-recipe (#1092) * removed outdated code * some refactoring * update onedal4py * temp: using daal4py backend for sklearnex testing leaving onlu onedal module tests * tmp: using daal4py backend * initial update for the build * misc fixes * added using spmd policy * added some python primitives for spmd policy * add instantiation for spmd interface * all together bringing updated changes from #1058 spmd interface dpctl integration updates for MPI * update onedal.spmd.ensemble * dpctl installation for ci initial * some tests fix * add missed decorator * update GPU support condition * removed merge artefacts * dev/linear-regression * All is working. Final polishing is required * Dispatching * Clang-format applied as weel as some comments from @samir-nasibli * PEP8 applied * Tests fixed * Minor * Minor * Minor * Minor * _onedal_supported fixes * Date in _common.py fixed * More date fixes * Proper initialization * Minor * PEP8 compliant * Minor * ENH: common for SPMD * PEP8 * Borrowing * Minor fixes * Minor * Comments applied * Minor * Switching by versions * Minor * Minor * More define switching * ONEDAL_STR as string * Minor * Correct DALROOT environment variable usage * No triling space * Changes in setup_*.py * Proper versions * Version define revisited * Comments by @Alexsandruss applied * Comparison in integers * Minor * Switch in linear.py * Minor * Minor * Optional testing * Correct dispatching * Minor * Bug fixes * Minor * Another try * Minor * Minor * Minor * Complete rework * PEP8 rules * Minor * Comments by @Alexsandruss * Minor * Minor * Another minor commit * Minor * Fixes for PEP8 * Minor * Fixes * New trimmed deselected list * PEP8 * Minor * Minor * Minor * Minor * Temp * Minor * Minor * Minor * Minor * Minor * Steady progress * Minor * Test for finiteness * Minor * Minor * Convertation * minor * Minor * minor * Minor * update build * pep8 codestyle * update * minor * Everything is working * License plate * Minor * Minor * Changes in testing * SPMD init changes * Minor * Minor * Further improvements * Minor * PEP8 application * Minor * Minor * required changes * Minor * Minor * CI changes * Reversed * Minor * minor * Minor improvements * Filtered list of tests * Minor changes according to @Alexsandruss * Filtering fixed * Another #ifdef --------- Co-authored-by: snasibli <samir.nasibli@intel.com> Co-authored-by: Alexander Andreev <alexander.andreev@intel.com> Co-authored-by: PivovarA <pivovar3al@gmail.com> Co-authored-by: Aleksandr Pivovar <apivovar@Aleksandrs-MacBook-Pro.local> Co-authored-by: Furkan Tektas <tektasfurkan@gmail.com> Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> Co-authored-by: msa <111298646+md-shafiul-alam@users.noreply.github.com> Co-authored-by: Shittu Samson <57238841+LOVE-DOCTOR@users.noreply.github.com> Co-authored-by: Nikolay Petrov <nikolay.a.petrov@intel.com> Co-authored-by: glasere@purdue.edu <42726565+ethanglaser@users.noreply.github.com>
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Description
Fixes for PEP8 errors in examples and generators