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feat: add deduplication ratio to 'ipfs dag stat' #9787

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merged 27 commits into from
Jun 6, 2023
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f1604da
checkpoint1
arthurgavazza Mar 31, 2023
ac3e6b0
feat: achieve correct minimal output
arthurgavazza Mar 31, 2023
ce81fd0
feat: start adding json encoding
arthurgavazza Mar 31, 2023
6dffb58
fix: fmt
arthurgavazza Mar 31, 2023
946fdd6
feat: add custom json encoder and format text encoder
arthurgavazza Apr 1, 2023
63d271b
fix: remove test json files
arthurgavazza Apr 1, 2023
fbc1c9c
Update core/commands/dag/dag.go
arthurgavazza May 3, 2023
eac10df
fix: check error on cdv write
arthurgavazza May 3, 2023
27547d3
fix: tsv title format
arthurgavazza May 3, 2023
7f38e7e
fix: print line with Fprintln
arthurgavazza May 3, 2023
76e5f20
fix: use boxo traverse
arthurgavazza May 3, 2023
b48dcb0
refactor: calculate summary with only one method
arthurgavazza May 3, 2023
9bbef7f
refactor: make simplifications
arthurgavazza May 3, 2023
620f73c
fix: add support to progressive information
arthurgavazza May 12, 2023
9146d95
fix: fix ci
arthurgavazza May 12, 2023
ee82e97
test: add a winner test using a fixture
arthurgavazza May 16, 2023
6641fb3
Merge branch 'master' into feat/add-deduplication-ratio-stat
arthurgavazza May 16, 2023
8d79bcb
Update test/cli/dag_test.go
arthurgavazza May 16, 2023
f1840ca
fix: deduplication calculations and tests
arthurgavazza May 21, 2023
864e91b
fix: lint
arthurgavazza May 21, 2023
b689c10
fix: CI
arthurgavazza May 21, 2023
220856f
Merge branch 'master' into feat/add-deduplication-ratio-stat
arthurgavazza May 21, 2023
f2051db
test: add text output tests
arthurgavazza Jun 4, 2023
0df029e
Merge branch 'master' into feat/add-deduplication-ratio-stat
arthurgavazza Jun 4, 2023
08f837c
Update core/commands/dag/dag.go
Jorropo Jun 5, 2023
538f5bb
Update test/cli/dag_test.go
Jorropo Jun 5, 2023
336a98c
FIXUP
Jorropo Jun 5, 2023
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109 changes: 103 additions & 6 deletions core/commands/dag/dag.go
Original file line number Diff line number Diff line change
@@ -1,6 +1,8 @@
package dagcmd

import (
"encoding/csv"
"encoding/json"
"fmt"
"io"

Expand Down Expand Up @@ -276,12 +278,81 @@ CAR file follows the CARv1 format: https://ipld.io/specs/transport/car/carv1/

// DagStat is a dag stat command response
type DagStat struct {
Size uint64
NumBlocks int64
Cid cid.Cid `json:",omitempty"`
Size uint64 `json:",omitempty"`
NumBlocks int64 `json:",omitempty"`
}

func (s *DagStat) String() string {
return fmt.Sprintf("Size: %d, NumBlocks: %d", s.Size, s.NumBlocks)
return fmt.Sprintf("%s %d %d", s.Cid.String()[:20], s.Size, s.NumBlocks)
}

func (s *DagStat) MarshalJSON() ([]byte, error) {
type Alias DagStat
/*
We can't rely on cid.Cid.MarshalJSON since it uses the {"/": "..."}
format. To make the output consistent and follow the Kubo API patterns
we use the Cid.String method
*/
return json.Marshal(struct {
Cid string `json:"Cid"`
*Alias
}{
Cid: s.Cid.String(),
Alias: (*Alias)(s),
})
}

func (s *DagStat) UnmarshalJSON(data []byte) error {
/*
We can't rely on cid.Cid.UnmarshalJSON since it uses the {"/": "..."}
format. To make the output consistent and follow the Kubo API patterns
we use the Cid.Parse method
*/
type Alias DagStat
aux := struct {
Cid string `json:"Cid"`
*Alias
}{
Alias: (*Alias)(s),
}
if err := json.Unmarshal(data, &aux); err != nil {
return err
}
Cid, err := cid.Parse(aux.Cid)
if err != nil {
return err
}
s.Cid = Cid
return nil
}

type DagStatSummary struct {
redundantSize uint64 `json:"-"`
UniqueBlocks int `json:",omitempty"`
TotalSize uint64 `json:",omitempty"`
SharedSize uint64 `json:",omitempty"`
Ratio float32 `json:",omitempty"`
DagStatsArray []*DagStat `json:"DagStats,omitempty"`
}

func (s *DagStatSummary) String() string {
return fmt.Sprintf("Total Size: %d\nUnique Blocks: %d\nShared Size: %d\nRatio: %f", s.TotalSize, s.UniqueBlocks, s.SharedSize, s.Ratio)
}

func (s *DagStatSummary) incrementTotalSize(size uint64) {
s.TotalSize += size
}
func (s *DagStatSummary) incrementRedundantSize(size uint64) {
s.redundantSize += size
}
func (s *DagStatSummary) appendStats(stats *DagStat) {
s.DagStatsArray = append(s.DagStatsArray, stats)
}

func (s *DagStatSummary) calculateSummary() {
s.Ratio = float32(s.redundantSize) / float32(s.TotalSize)
s.SharedSize = s.redundantSize - s.TotalSize
}

// DagStatCmd is a command for getting size information about an ipfs-stored dag
Expand All @@ -296,24 +367,50 @@ Note: This command skips duplicate blocks in reporting both size and the number
`,
},
Arguments: []cmds.Argument{
cmds.StringArg("root", true, false, "CID of a DAG root to get statistics for").EnableStdin(),
cmds.StringArg("root", true, true, "CID of a DAG root to get statistics for").EnableStdin(),
},
Options: []cmds.Option{
cmds.BoolOption(progressOptionName, "p", "Return progressive data while reading through the DAG").WithDefault(true),
},
Run: dagStat,
Type: DagStat{},
Type: DagStatSummary{},
PostRun: cmds.PostRunMap{
cmds.CLI: finishCLIStat,
},
Encoders: cmds.EncoderMap{
cmds.Text: cmds.MakeTypedEncoder(func(req *cmds.Request, w io.Writer, event *DagStat) error {
cmds.Text: cmds.MakeTypedEncoder(func(req *cmds.Request, w io.Writer, event *DagStatSummary) error {
fmt.Fprintln(w)
csvWriter := csv.NewWriter(w)
csvWriter.Comma = '\t'
cidSpacing := len(event.DagStatsArray[0].Cid.String())
header := []string{fmt.Sprintf("%-*s", cidSpacing, "CID"), fmt.Sprintf("%-15s", "Blocks"), "Size"}
if err := csvWriter.Write(header); err != nil {
return err
}
for _, dagStat := range event.DagStatsArray {
numBlocksStr := fmt.Sprint(dagStat.NumBlocks)
err := csvWriter.Write([]string{
dagStat.Cid.String(),
fmt.Sprintf("%-15s", numBlocksStr),
fmt.Sprint(dagStat.Size),
})
if err != nil {
return err
}
}
csvWriter.Flush()
fmt.Fprint(w, "\nSummary\n")
_, err := fmt.Fprintf(
w,
"%v\n",
event,
)
fmt.Fprint(w, "\n\n")
return err
}),
cmds.JSON: cmds.MakeTypedEncoder(func(req *cmds.Request, w io.Writer, event *DagStatSummary) error {
return json.NewEncoder(w).Encode(event)
},
),
},
}
113 changes: 66 additions & 47 deletions core/commands/dag/stat.go
Original file line number Diff line number Diff line change
Expand Up @@ -6,70 +6,82 @@ import (
"os"

"github.com/ipfs/boxo/coreiface/path"
mdag "github.com/ipfs/boxo/ipld/merkledag"
"github.com/ipfs/boxo/ipld/merkledag/traverse"
cid "github.com/ipfs/go-cid"
cmds "github.com/ipfs/go-ipfs-cmds"
"github.com/ipfs/kubo/core/commands/cmdenv"
"github.com/ipfs/kubo/core/commands/e"

mdag "github.com/ipfs/boxo/ipld/merkledag"
cmds "github.com/ipfs/go-ipfs-cmds"
)

// TODO cache every cid traversal in a dp cache
// if the cid exists in the cache, don't traverse it, and use the cached result
// to compute the new state

func dagStat(req *cmds.Request, res cmds.ResponseEmitter, env cmds.Environment) error {
progressive := req.Options[progressOptionName].(bool)

api, err := cmdenv.GetApi(env, req)
if err != nil {
return err
}

rp, err := api.ResolvePath(req.Context, path.New(req.Arguments[0]))
if err != nil {
return err
}

if len(rp.Remainder()) > 0 {
return fmt.Errorf("cannot return size for anything other than a DAG with a root CID")
}

nodeGetter := mdag.NewSession(req.Context, api.Dag())
obj, err := nodeGetter.Get(req.Context, rp.Cid())
if err != nil {
return err
}

dagstats := &DagStat{}
err = traverse.Traverse(obj, traverse.Options{
DAG: nodeGetter,
Order: traverse.DFSPre,
Func: func(current traverse.State) error {
dagstats.Size += uint64(len(current.Node.RawData()))
dagstats.NumBlocks++

if progressive {
if err := res.Emit(dagstats); err != nil {
return err
}
}
return nil
},
ErrFunc: nil,
SkipDuplicates: true,
})
if err != nil {
return fmt.Errorf("error traversing DAG: %w", err)
}
cidSet := cid.NewSet()
dagStatSummary := &DagStatSummary{DagStatsArray: []*DagStat{}}
for _, a := range req.Arguments {
rp, err := api.ResolvePath(req.Context, path.New(a))
if err != nil {
return err
}
if len(rp.Remainder()) > 0 {
return fmt.Errorf("cannot return size for anything other than a DAG with a root CID")
}

if !progressive {
if err := res.Emit(dagstats); err != nil {
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obj, err := nodeGetter.Get(req.Context, rp.Cid())
if err != nil {
return err
}
dagstats := &DagStat{Cid: rp.Cid()}
dagStatSummary.appendStats(dagstats)
err = traverse.Traverse(obj, traverse.Options{
DAG: nodeGetter,
Order: traverse.DFSPre,
Func: func(current traverse.State) error {
fmt.Println("previousDagStatSize:", dagstats.Size)
currentNodeSize := uint64(len(current.Node.RawData()))
dagstats.Size += currentNodeSize
dagstats.NumBlocks++
if !cidSet.Has(current.Node.Cid()) {
dagStatSummary.incrementTotalSize(currentNodeSize)
}
dagStatSummary.incrementRedundantSize(currentNodeSize)
cidSet.Add(current.Node.Cid())
if progressive {
if err := res.Emit(dagStatSummary); err != nil {
return err
}
}
return nil
},
ErrFunc: nil,
SkipDuplicates: true,
})
if err != nil {
return fmt.Errorf("error traversing DAG: %w", err)
}
}

dagStatSummary.UniqueBlocks = cidSet.Len()
dagStatSummary.calculateSummary()

if err := res.Emit(dagStatSummary); err != nil {
return err
}
return nil
}

func finishCLIStat(res cmds.Response, re cmds.ResponseEmitter) error {
var dagStats *DagStat
var dagStats *DagStatSummary
for {
v, err := res.Next()
if err != nil {
Expand All @@ -78,13 +90,20 @@ func finishCLIStat(res cmds.Response, re cmds.ResponseEmitter) error {
}
return err
}

out, ok := v.(*DagStat)
if !ok {
switch out := v.(type) {
case *DagStatSummary:
dagStats = out
if dagStats.Ratio == 0 {
length := len(dagStats.DagStatsArray)
if length > 0 {
currentStat := dagStats.DagStatsArray[length-1]
fmt.Fprintf(os.Stderr, "CID: %s, Size: %d, NumBlocks: %d\n", currentStat.Cid, currentStat.Size, currentStat.NumBlocks)
}
}
default:
return e.TypeErr(out, v)

}
dagStats = out
fmt.Fprintf(os.Stderr, "%v\r", out)
}
return re.Emit(dagStats)
}
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