Merge pull request #210 from jakobrunge/developer

updated readme and LPCMCI tutorial
jakobrunge · Apr 14, 2022 · b5e0f0b · b5e0f0b
2 parents 26950d7 + abf0035
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diff --git a/README.md b/README.md
@@ -7,6 +7,8 @@ Version 5.0
 
 [Documentation](https://jakobrunge.github.io/tigramite/)
 
+[Tutorials](https://github.com/jakobrunge/tigramite/tree/master/tutorials/)
+
 [Simple GUI](https://github.com/stbachinger/TigramiteGui)
 
 ## Overview

diff --git a/release_on_pip.sh b/release_on_pip.sh
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-version="50115"
+version="50116"
 
 # Steps to move from github to pip
 # (Make sure pypi token exists)

diff --git a/setup.py b/setup.py
@@ -63,7 +63,7 @@ def run(self):
 # Run the setup
 setup(
     name="tigramite",
-    version="5.0.1.16",
+    version="5.0.1.17",
     packages=["tigramite", "tigramite.independence_tests", "tigramite.toymodels"],
     license="GNU General Public License v3.0",
     description="Tigramite causal discovery for time series",

diff --git a/tutorials/tigramite_tutorial_latent-pcmci.ipynb b/tutorials/tigramite_tutorial_latent-pcmci.ipynb
@@ -697,7 +697,7 @@
    "id": "4292aca1",
    "metadata": {},
    "source": [
-    "Based on the results of `run_bivci`, we choose to apply LPCMCI with `tau_max = 5`. We further choose `pc_alpha = 0.01` and apart from that do not modify the default hyperparameter settings."
+    "Based on the results of `run_bivci`, we choose to apply LPCMCI with `tau_max = 5` since after that lag, the lag functions decay to zero. Note that this is only a heuristic. In addition, you may also check scatter plots as done in the PCMCI tutorial in order to choose an appropriate conditional independence test. We further choose `pc_alpha = 0.01` and apart from that do not modify the default hyperparameter settings."
    ]
   },
   {