CyRK v0.11.0

Changes

New:

• WrapCySolverResult result class now provides user access to attribute num_y.

Removed:

• Removed previous cyrk_ode and older version of the CySolver class-based solver.
  • The functionality of cyrk_ode is now handled by the new (as of v0.10.0) pysolve_ivp function.
  • The functionality of CySolver is partly handled by the new (as of v0.10.0) cysolve_ivp function.
    • Note that the new cysolve_ivp is a functional approach. A class based approach like the older CySolver class supported is no longer available but could be easy to implement. If there is interest please create a Github issue for it.

Refactors:

• Refactored the new cysolver and pysolver files to remove "New". This will break imports based on previous versions.
• Broke up cysolver and pysolver into different files to isolate each other's code.

Other:

• Changed the default ordering for diffeq function inputs to follow the scheme dydt(dy, t, y); previously it was dydt(t, y, dy). This affects the cy2nb and nb2cy helper functions.
• Updated performance module to use new methods over old.

Demos:

• Fixed typo in the type of the mixed-type args container.
• Updated to work with new refactoring.

Tests:

• Updated tests to use pysolver where cyrk_ode was used.
• Changed tolerances and other inputs to try to make some tests faster.

Dependencies:

• Tested that CyRK works with numpy v2.X; but a lot of other packages don't right now. So setting it as upper limit.
• Tested that CyRK can not work with Python 3.13 yet due to numba dependence. See issue

GitHub Tracked Changes

• Merge main back into branch by @jrenaud90 in #65
• ver0.11.0 by @jrenaud90 in #68

Full Changelog: v0.10.2...v0.11.0