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@jump-cellpainting

JUMP-Cell Painting Consortium

Joint Undertaking in Morphological Profiling

Popular repositories Loading

  1. datasets datasets Public

    Images and other data from the JUMP Cell Painting Consortium

    Jupyter Notebook 160 17

  2. 2024_Chandrasekaran_NatureMethods 2024_Chandrasekaran_NatureMethods Public

    Jupyter Notebook 55 11

  3. JUMP-Target JUMP-Target Public

    Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays

    20 5

  4. JUMP-MOA JUMP-MOA Public

    A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound

    6 3

  5. profiling-recipe profiling-recipe Public

    Forked from cytomining/profiling-recipe

    Image-based Profiling Recipe

    Python 5 4

  6. embedder embedder Public

    Computing per-cell embeddings for all cpg0016-jump

    Python 2 1

Repositories

Showing 10 of 15 repositories
  • jump-cellpainting/2024_Chandrasekaran_Morphmap’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 3 0 0 Updated Nov 5, 2024
  • datasets Public

    Images and other data from the JUMP Cell Painting Consortium

    jump-cellpainting/datasets’s past year of commit activity
    Jupyter Notebook 160 BSD-3-Clause 17 34 (1 issue needs help) 1 Updated Nov 2, 2024
  • cpg0016-jump-orf-data Public

    Data repository for cpg0016-jump[orf]

    jump-cellpainting/cpg0016-jump-orf-data’s past year of commit activity
    1 BSD-3-Clause 1 0 2 Updated Oct 21, 2024
  • compound-annotator Public archive
    jump-cellpainting/compound-annotator’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 4 4 0 Updated Oct 20, 2024
  • embedder Public

    Computing per-cell embeddings for all cpg0016-jump

    jump-cellpainting/embedder’s past year of commit activity
    Python 2 Apache-2.0 1 2 0 Updated May 31, 2024
  • JUMP-MOA Public

    A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound

    jump-cellpainting/JUMP-MOA’s past year of commit activity
    6 MIT 3 0 0 Updated Apr 7, 2024
  • JUMP-Target Public

    Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays

    jump-cellpainting/JUMP-Target’s past year of commit activity
    20 MIT 5 6 0 Updated Apr 7, 2024
  • jump-cellpainting/2024_Chandrasekaran_NatureMethods’s past year of commit activity
    Jupyter Notebook 55 BSD-3-Clause 11 3 0 Updated Mar 19, 2024
  • jump-cellpainting/jump-scope-analysis’s past year of commit activity
    Jupyter Notebook 0 0 3 0 Updated Jun 14, 2023
  • cpg0014-jump-adipocyte-data Public

    Data repository for cpg0014-jump-adipocyte

    jump-cellpainting/cpg0014-jump-adipocyte-data’s past year of commit activity
    0 BSD-3-Clause 0 2 0 Updated Mar 2, 2023

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