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# Byte-compiled / optimized / DLL files | ||
__pycache__/ | ||
*.py[cod] | ||
*$py.class | ||
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# C extensions | ||
*.so | ||
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# Distribution / packaging | ||
.Python | ||
env/ | ||
build/ | ||
develop-eggs/ | ||
dist/ | ||
downloads/ | ||
eggs/ | ||
.eggs/ | ||
lib/ | ||
lib64/ | ||
parts/ | ||
sdist/ | ||
var/ | ||
wheels/ | ||
*.egg-info/ | ||
.installed.cfg | ||
*.egg | ||
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# PyInstaller | ||
# Usually these files are written by a python script from a template | ||
# before PyInstaller builds the exe, so as to inject date/other infos into it. | ||
*.manifest | ||
*.spec | ||
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# Installer logs | ||
pip-log.txt | ||
pip-delete-this-directory.txt | ||
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# Unit test / coverage reports | ||
htmlcov/ | ||
.tox/ | ||
.coverage | ||
.coverage.* | ||
.cache | ||
nosetests.xml | ||
coverage.xml | ||
*.cover | ||
.hypothesis/ | ||
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# Translations | ||
*.mo | ||
*.pot | ||
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# Django stuff: | ||
*.log | ||
local_settings.py | ||
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# Flask stuff: | ||
instance/ | ||
.webassets-cache | ||
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# Scrapy stuff: | ||
.scrapy | ||
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# Sphinx documentation | ||
docs/_build/ | ||
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# PyBuilder | ||
target/ | ||
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# Jupyter Notebook | ||
.ipynb_checkpoints | ||
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# pyenv | ||
.python-version | ||
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# celery beat schedule file | ||
celerybeat-schedule | ||
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# SageMath parsed files | ||
*.sage.py | ||
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# dotenv | ||
.env | ||
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# virtualenv | ||
.venv | ||
venv/ | ||
ENV/ | ||
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# Spyder project settings | ||
.spyderproject | ||
.spyproject | ||
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# Rope project settings | ||
.ropeproject | ||
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# mkdocs documentation | ||
/site | ||
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# mypy | ||
.mypy_cache/ | ||
.idea/ | ||
*.cfg | ||
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# pytest | ||
.pytest_cache/ | ||
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# MS VS Code | ||
.vscode/ |
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# ref : Francesco Mosconi, Travis + Anaconda + Jupyter, https://github.com/ghego/travis_anaconda_jupyter | ||
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name: travis_anaconda_jupyter | ||
channels: | ||
- defaults | ||
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dependencies: | ||
- python<3.7 | ||
# Anaconda 5.0.1 python 3.6 | ||
- numpy=1.13.3 | ||
- scipy=0.19.1 | ||
- sympy=1.1.1 | ||
- jupyter=1.0.0 | ||
- pytest=3.2.1 | ||
- matplotlib=2.1.0 | ||
- pandas=0.23.4 |
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# ref : Francesco Mosconi, Travis + Anaconda + Jupyter, https://github.com/ghego/travis_anaconda_jupyter | ||
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name: travis_anaconda_jupyter | ||
channels: | ||
- defaults | ||
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dependencies: | ||
- python<3.8 | ||
# Anaconda 5.3 python 3.7 | ||
# https://docs.anaconda.com/anaconda/packages/py3.7_win-64/ | ||
- jupyter=1.0.0 | ||
- matplotlib=2.2.3 | ||
- numpy=1.15.1 | ||
- pandas=0.23.4 | ||
- pytest=3.8.0 | ||
- scipy=1.1.0 | ||
- statsmodels=0.9.0 | ||
- sympy=1.1.1 |
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# ref : Francesco Mosconi, Travis + Anaconda + Jupyter, https://github.com/ghego/travis_anaconda_jupyter | ||
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name: travis_anaconda_jupyter | ||
channels: | ||
- defaults | ||
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dependencies: | ||
- python>=3.7 | ||
- jupyter>=1.0.0 | ||
- matplotlib>=2.2.3 | ||
- numpy>=1.15.1 | ||
- pandas>=0.23.4 | ||
- pytest>=3.8.0 | ||
- scipy>=1.1.0 | ||
- statsmodels>=0.9.0 | ||
- sympy>=1.1.1 |
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# ref : Francesco Mosconi, Travis + Anaconda + Jupyter, https://github.com/ghego/travis_anaconda_jupyter | ||
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import os | ||
import pytest | ||
import subprocess | ||
import tempfile | ||
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def check_kernel_spec(): | ||
# https://jupyter-client.readthedocs.io/en/latest/api/kernelspec.html | ||
import jupyter_client.kernelspec as jk | ||
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kernel_spec_manager = jk.KernelSpecManager() | ||
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print(kernel_spec_manager.get_all_specs()) | ||
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def _exec_notebook(path): | ||
# http://nbconvert.readthedocs.io/en/latest/execute_api.html | ||
# ijstokes et al, Command line execution of a jupyter notebook fails in default Anaconda 4.1, https://github.com/Anaconda-Platform/nb_conda_kernels/issues/34 | ||
with tempfile.NamedTemporaryFile(suffix=".ipynb") as fout: | ||
args = ["jupyter", "nbconvert", "--to", "notebook", "--execute", | ||
"--ExecutePreprocessor.timeout=1000", | ||
"--ExecutePreprocessor.kernel_name=python", | ||
"--output", fout.name, path] | ||
subprocess.check_call(args) | ||
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folder_list = ( | ||
'00_introduction', | ||
'10_root_finding', | ||
'20_interpolation', | ||
'30_num_int', | ||
'40_linear_algebra_1', | ||
'50_ode', | ||
'60_linear_algebra_2', | ||
) | ||
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# https://docs.pytest.org/en/latest/example/parametrize.html | ||
@pytest.mark.parametrize("folder", folder_list) | ||
def test_ipynb_in_folder(folder): | ||
path = os.path.join(os.pardir, folder) | ||
ext = 'ipynb' | ||
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# recursive loop | ||
for root, dirnames, filenames in os.walk(path): | ||
if 'ipynb_checkpoints' not in root: | ||
# files loop | ||
for filename in filenames: | ||
if os.path.splitext(filename)[-1].endswith(ext): | ||
print('test() : %s %s' % (root, filename)) | ||
_exec_notebook(os.path.join(root, filename)) |