Set optimized parameters for read lengths 50, 100, 300

Closes #272
ksahlin · Sep 20, 2023 · 57b00e7 · 57b00e7
1 parent 3190f7f
commit 57b00e7
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/src/indexparameters.cpp b/src/indexparameters.cpp
@@ -35,13 +35,13 @@ struct Profile {
 static auto max{std::numeric_limits<int>::max()};
 
 static std::vector<Profile> profiles = {
-        Profile{ 50,  65, 20, -4, -3,  2},
+        Profile{ 50,  65, 18, -4, -2, -2},
         Profile{ 75,  90, 20, -4, -2, -2},
-        Profile{100, 110, 20, -4, -2,  2},
+        Profile{100, 110, 20, -4, -1, -1},
         Profile{125, 135, 20, -4, -1,  4},
         Profile{150, 175, 20, -4,  1,  7},
         Profile{250, 275, 20, -4,  4, 13},
-        Profile{300, 375, 22, -4,  2, 12},
+        Profile{300, 375, 23, -4,  6, 12},
         Profile{400, max, 23, -6,  2, 12},
     };