Changelog entry

ksahlin · Nov 13, 2023 · f5e2f15 · f5e2f15
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@@ -11,6 +11,9 @@
 * #321: Fix: For paired-end reads that cannot be placed as proper pairs, we now
   prefer placing them onto the same chrosome instead of on different ones if
   there is a choice.
+* #328: Fix MAPQ computation for single-end reads. While previously, most MAPQ
+  values for single end alignments tended to be either 0 or 60, strobealign now
+  uses the range of possible values a bit better.
 * #318: Added a `--details` option mainly intended for debugging. When used,
   some strobealign-specific tags are added to the SAM output that inform about
   things like no. of seeds found, whether mate rescue was performed etc.