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@latch-verified

Latch Verified

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Latch Verified is maintained + open-source bioinformatics software built with the LatchBio SDK

Why Verified?

For any area of bioinformatics, the set of possible tools and algorithms is vast and constantly evolving. It is difficult to benchmark and stay up-to-date with the best tools, integrate them from academic repositories to production-grade environments, and expose them to bench scientists with interfaces.

Latch Verified is a suite of high-quality bioinformatics software for major domains of bioinformatics featuring:

  • benchmarked tool-selection from frequent literature reviews
  • maintained + tested open-source code
  • reliable execution battle-tested by industry leaders and prominent labs
  • intuitive workflow parameters distilled from the feedback of hundreds of scientists

Verified Workflows

Further Reading

Slack

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  1. bulk-rnaseq bulk-rnaseq Public

    Bulk RNA-seq analysis.

    Python 34 4

  2. diff-exp diff-exp Public

    Differential expression analysis.

    Python 8 1

  3. pathway pathway Public

    Associate pathways + gene ontologies with significant genes.

    Python 10

Repositories

Showing 7 of 7 repositories
  • colabfold Public
    latch-verified/colabfold’s past year of commit activity
    Python 0 0 0 1 Updated Oct 3, 2024
  • flow-cyte Public
    latch-verified/flow-cyte’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 15, 2024
  • bulk-rnaseq Public

    Bulk RNA-seq analysis.

    latch-verified/bulk-rnaseq’s past year of commit activity
    Python 34 MIT 4 6 2 Updated Oct 25, 2023
  • diff-exp Public

    Differential expression analysis.

    latch-verified/diff-exp’s past year of commit activity
    Python 8 1 7 0 Updated Oct 13, 2023
  • pathway Public

    Associate pathways + gene ontologies with significant genes.

    latch-verified/pathway’s past year of commit activity
    Python 10 0 2 0 Updated Jun 5, 2023
  • trim_galore Public

    A wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files

    latch-verified/trim_galore’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 11, 2023
  • .github Public
    latch-verified/.github’s past year of commit activity
    2 0 0 0 Updated Aug 3, 2022

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