Merge remote-tracking branch 'upstream/master'

* upstream/master: (41 commits)
  refactor(git-glow): Add config interpolation for git-flow messages (ohmyzsh#7481)
  feat(git): Add aliases for 'git commit -S -s [-m]' (ohmyzsh#7616)
  feat(pm2): Adding a pm2 plugin (ohmyzsh#7684)
  feat(supervisor): Add aliases for supervisor (ohmyzsh#5819)
  perf(mercurial): speed up mercurial plugin (ohmyzsh#4591)
  feat(nvm): introduce customizable list of command that triggers lazy loading (ohmyzsh#9946)
  feat(zoxide): add new plugin for zoxide (a smarter cd CLI tool) (ohmyzsh#9950)
  feat(git): Add alias for 'git checkout --recurse-submodules' (ohmyzsh#9958)
  feat(pip): add alias for updating all requirements via pip (ohmyzsh#9965)
  style(mlh): update the official theme of Major League Hacking (ohmyzsh#9971)
  feat(kubectx): adding a new plugin for 'kubectx' (ohmyzsh#6114)
  style(kubectl): Being more explicit alias to the main CLI tool instead of to another alias (ohmyzsh#6567)
  feat(plugins): Add Ag completion (ohmyzsh#3534)
  feat(plugins): New plugins for samtools and bedtools (ohmyzsh#3574)
  feat(plugins): Plugin "debian": Switch order of "apt" and "aptitude" for detection (ohmyzsh#7533)
  feat(supervisord): autocomplete for restart command (ohmyzsh#5144)
  feat(plugins): Add helper function to get current mercurial bookmark (ohmyzsh#4970)
  feat(plugins): Add a new showpkg alias to ubuntu plugin (ohmyzsh#4653)
  feat(plugins): Add new isodate plugin for friendly date formatting commands (ohmyzsh#9963)
  feat(plugins): add gpr alias for /git pull -rebase/ which is easier to remember (ohmyzsh#9964)
  ...

.github/CODEOWNERS

@@ -7,3 +7,4 @@ plugins/gitfast/                    @felipec
 plugins/sdk/                        @rgoldberg
 plugins/universalarchive/           @Konfekt
 plugins/wp-cli/                     @joshmedeski
+plugins/zoxide/                     @ajeetdsouza

lib/functions.zsh

@@ -13,7 +13,7 @@ function upgrade_oh_my_zsh() {
   omz update
 }
 
-function take() {
+function takedir() {
   mkdir -p $@ && cd ${@:$#}
 }
 
@@ -37,6 +37,30 @@ function open_command() {
   ${=open_cmd} "$@" &>/dev/null
 }
 
+function takeurl() {
+  data=$(mktemp)
+  curl -L $1 > $data
+  tar xf $data
+  thedir=$(tar tf $data | head -1)
+  rm $data
+  cd $thedir
+}
+
+function takegit() {
+  git clone $1
+  cd $(basename ${1%%.git})
+}
+
+function take() {
+  if [[ $1 =~ ^(https?|ftp).*\.tar\.(gz|bz2|xz)$ ]]; then
+    takeurl $1
+  elif [[ $1 =~ ^([A-Za-z0-9]\+@|https?|git|ssh|ftps?|rsync).*\.git/?$ ]]; then
+    takegit $1
+  else
+    takedir $1
+  fi
+}
+
 #
 # Get the value of an alias.
 #

lib/prompt_info_functions.zsh

@@ -19,6 +19,7 @@ function chruby_prompt_info \
   virtualenv_prompt_info \
   jenv_prompt_info \
   tf_prompt_info \
+  kubectx_prompt_info \
 {
   return 1
 }

plugins/ag/README.md

@@ -0,0 +1,13 @@
+# The Silver Searcher
+
+This plugin provides completion support for [`ag`](https://github.com/ggreer/the_silver_searcher).
+
+To use it, add ag to the plugins array in your zshrc file.
+
+```zsh
+plugins=(... aws)
+```
+
+## INSTALLATION NOTES
+
+Besides oh-my-zsh, `ag` needs to be installed by following these steps: https://github.com/ggreer/the_silver_searcher#installing.

plugins/ag/_ag

@@ -0,0 +1,66 @@
+#compdef ag
+#autoload
+
+typeset -A opt_args
+
+# Took the liberty of not listing every option… specially aliases and -D
+_ag () {
+  local -a _1st_arguments
+  _1st_arguments=(
+    '--ackmate:Print results in AckMate-parseable format'
+    {'-A','--after'}':[LINES] Print lines after match (Default: 2)'
+    {'-B','--before'}':[LINES] Print lines before match (Default: 2)'
+    '--break:Print newlines between matches in different files'
+    '--nobreak:Do not print newlines between matches in different files'
+    {'-c','--count'}':Only print the number of matches in each file'
+    '--color:Print color codes in results (Default: On)'
+    '--nocolor:Do not print color codes in results'
+    '--color-line-number:Color codes for line numbers (Default: 1;33)'
+    '--color-match:Color codes for result match numbers (Default: 30;43)'
+    '--color-path:Color codes for path names (Default: 1;32)'
+    '--column:Print column numbers in results'
+    {'-H','--heading'}':Print file names (On unless searching a single file)'
+    '--noheading:Do not print file names (On unless searching a single file)'
+    '--line-numbers:Print line numbers even for streams'
+    {'-C','--context'}':[LINES] Print lines before and after matches (Default: 2)'
+    '-g:[PATTERN] Print filenames matching PATTERN'
+    {'-l','--files-with-matches'}':Only print filenames that contain matches'
+    {'-L','--files-without-matches'}':Only print filenames that do not contain matches'
+    '--no-numbers:Do not print line numbers'
+    {'-o','--only-matching'}':Prints only the matching part of the lines'
+    '--print-long-lines:Print matches on very long lines (Default: 2k characters)'
+    '--passthrough:When searching a stream, print all lines even if they do not match'
+    '--silent:Suppress all log messages, including errors'
+    '--stats:Print stats (files scanned, time taken, etc.)'
+    '--vimgrep:Print results like vim :vimgrep /pattern/g would'
+    {'-0','--null'}':Separate filenames with null (for "xargs -0")'
+
+    {'-a','--all-types'}':Search all files (does not include hidden files / .gitignore)'
+    '--depth:[NUM] Search up to NUM directories deep (Default: 25)'
+    {'-f','--follow'}':Follow symlinks'
+    {'-G','--file-search-regex'}':[PATTERN] Limit search to filenames matching PATTERN'
+    '--hidden:Search hidden files (obeys .*ignore files)'
+    {'-i','--ignore-case'}':Match case insensitively'
+    '--ignore:[PATTERN] Ignore files/directories matching PATTERN'
+    {'-m','--max-count'}':[NUM] Skip the rest of a file after NUM matches (Default: 10k)'
+    {'-p','--path-to-agignore'}':[PATH] Use .agignore file at PATH'
+    {'-Q','--literal'}':Do not parse PATTERN as a regular expression'
+    {'-s','--case-sensitive'}':Match case'
+    {'-S','--smart-case'}':Insensitive match unless PATTERN has uppercase (Default: On)'
+    '--search-binary:Search binary files for matches'
+    {'-t','--all-text'}':Search all text files (Hidden files not included)'
+    {'-u','--unrestricted'}':Search all files (ignore .agignore and _all_)'
+    {'-U','--skip-vcs-ignores'}':Ignore VCS files (stil obey .agignore)'
+    {'-v','--invert-match'}':Invert match'
+    {'-w','--word-regexp'}':Only match whole words'
+    {'-z','--search-zip'}':Search contents of compressed (e.g., gzip) files'
+
+    '--list-file-types:list of supported file types'
+  )
+
+  if [[ $words[-1] =~ "^-" ]]; then
+    _describe -t commands "ag options" _1st_arguments && ret=0
+  else
+    _files && ret=0
+  fi
+}

plugins/aliases/README.md

@@ -0,0 +1,21 @@
+## Aliases Cheatsheet
+
+**Maintainer:** [@hqingyi](https://github.com/hqingyi)
+
+With lots of 3rd-party amazing aliases installed, this plugin helps list the shortcuts
+that are currently available based on the plugins you have enabled.
+
+Enable this plugin by adding it to your `plugins` definition in `~/.zshrc`.
+
+  ```
+  plugins=(aliases)
+  ```
+
+Requirements: Python needs to be installed.
+
+### Usage
+
+```
+  acs: group all alias
+  acs $keywordquickly filter alias & highlight
+```

plugins/aliases/aliases.plugin.zsh

@@ -0,0 +1,10 @@
+# with lots of 3rd-party amazing aliases installed, just need something to explore it quickly.
+#
+# - acs: alias cheatsheet
+#   group alias by command, pass addition argv to grep.
+ALIASES_PLUGIN_ROOT=$(cd `dirname $0` && pwd)
+function acs(){
+    which python >>/dev/null
+    [[ $? -eq 1 ]] && echo "[error]no python executable detected!" && return
+    alias | python $ALIASES_PLUGIN_ROOT/cheatsheet.py $@
+}

plugins/aliases/cheatsheet.py

@@ -0,0 +1,55 @@
+#!/usr/bin/env python
+import sys
+import itertools
+import termcolor
+
+def parse(line):
+    left = line[0:line.find('=')].strip()
+    right = line[line.find('=')+1:].strip('\'"\n ')
+    try:
+        cmd = next(part for part in right.split() if len([char for char in '=<>' if char in part])==0)
+    except StopIteration:
+        cmd = right
+    return (left, right, cmd)
+
+def cheatsheet(lines):
+    exps = [ parse(line) for line in lines ]
+    cheatsheet = {'_default': []}
+    for key, group in itertools.groupby(exps, lambda exp:exp[2]):
+        group_list = [ item for item in group ]
+        if len(group_list)==1:
+            target_aliases = cheatsheet['_default']
+        else:
+            if key not in cheatsheet:
+                cheatsheet[key] = []
+            target_aliases = cheatsheet[key]
+        target_aliases.extend(group_list)
+    return cheatsheet
+
+def pretty_print_group(key, aliases, hightlight=None):
+    if len(aliases) == 0:
+        return
+    group_hl_formatter = lambda g, hl: termcolor.colored(hl, 'yellow').join([termcolor.colored(part, 'red') for part in ('[%s]' % g).split(hl)])
+    alias_hl_formatter = lambda alias, hl: termcolor.colored(hl, 'yellow').join([termcolor.colored(part, 'green') for part in ('\t%s = %s' % alias[0:2]).split(hl)])
+    group_formatter = lambda g: termcolor.colored('[%s]' % g, 'red')
+    alias_formatter = lambda alias: termcolor.colored('\t%s = %s' % alias[0:2], 'green')
+    if hightlight and len(hightlight)>0:
+        print (group_hl_formatter(key, hightlight))
+        print ('\n'.join([alias_hl_formatter(alias, hightlight) for alias in aliases]))
+    else:
+        print (group_formatter(key))
+        print ('\n'.join([alias_formatter(alias) for alias in aliases]))
+    print ('')
+
+def pretty_print(cheatsheet, wfilter):
+    sorted_key = sorted(cheatsheet.keys())
+    for key in sorted_key:
+        aliases = cheatsheet.get(key)
+        if not wfilter:
+            pretty_print_group(key, aliases, wfilter)
+        else:
+            pretty_print_group(key, [ alias for alias in aliases if alias[0].find(wfilter)>-1 or alias[1].find(wfilter)>-1], wfilter)
+
+if __name__ == '__main__':
+    lines = sys.stdin.readlines()
+    pretty_print(cheatsheet(lines), sys.argv[1] if len(sys.argv)>1 else None)

plugins/aliases/termcolor.py

@@ -0,0 +1,168 @@
+# coding: utf-8
+# Copyright (c) 2008-2011 Volvox Development Team
+#
+# Permission is hereby granted, free of charge, to any person obtaining a copy
+# of this software and associated documentation files (the "Software"), to deal
+# in the Software without restriction, including without limitation the rights
+# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+# copies of the Software, and to permit persons to whom the Software is
+# furnished to do so, subject to the following conditions:
+#
+# The above copyright notice and this permission notice shall be included in
+# all copies or substantial portions of the Software.
+#
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+# THE SOFTWARE.
+#
+# Author: Konstantin Lepa <konstantin.lepa@gmail.com>
+
+"""ANSII Color formatting for output in terminal."""
+
+from __future__ import print_function
+import os
+
+
+__ALL__ = [ 'colored', 'cprint' ]
+
+VERSION = (1, 1, 0)
+
+ATTRIBUTES = dict(
+        list(zip([
+            'bold',
+            'dark',
+            '',
+            'underline',
+            'blink',
+            '',
+            'reverse',
+            'concealed'
+            ],
+            list(range(1, 9))
+            ))
+        )
+del ATTRIBUTES['']
+
+
+HIGHLIGHTS = dict(
+        list(zip([
+            'on_grey',
+            'on_red',
+            'on_green',
+            'on_yellow',
+            'on_blue',
+            'on_magenta',
+            'on_cyan',
+            'on_white'
+            ],
+            list(range(40, 48))
+            ))
+        )
+
+
+COLORS = dict(
+        list(zip([
+            'grey',
+            'red',
+            'green',
+            'yellow',
+            'blue',
+            'magenta',
+            'cyan',
+            'white',
+            ],
+            list(range(30, 38))
+            ))
+        )
+
+
+RESET = '\033[0m'
+
+
+def colored(text, color=None, on_color=None, attrs=None):
+    """Colorize text.
+
+    Available text colors:
+        red, green, yellow, blue, magenta, cyan, white.
+
+    Available text highlights:
+        on_red, on_green, on_yellow, on_blue, on_magenta, on_cyan, on_white.
+
+    Available attributes:
+        bold, dark, underline, blink, reverse, concealed.
+
+    Example:
+        colored('Hello, World!', 'red', 'on_grey', ['blue', 'blink'])
+        colored('Hello, World!', 'green')
+    """
+    if os.getenv('ANSI_COLORS_DISABLED') is None:
+        fmt_str = '\033[%dm%s'
+        if color is not None:
+            text = fmt_str % (COLORS[color], text)
+
+        if on_color is not None:
+            text = fmt_str % (HIGHLIGHTS[on_color], text)
+
+        if attrs is not None:
+            for attr in attrs:
+                text = fmt_str % (ATTRIBUTES[attr], text)
+
+        text += RESET
+    return text
+
+
+def cprint(text, color=None, on_color=None, attrs=None, **kwargs):
+    """Print colorize text.
+
+    It accepts arguments of print function.
+    """
+
+    print((colored(text, color, on_color, attrs)), **kwargs)
+
+
+if __name__ == '__main__':
+    print('Current terminal type: %s' % os.getenv('TERM'))
+    print('Test basic colors:')
+    cprint('Grey color', 'grey')
+    cprint('Red color', 'red')
+    cprint('Green color', 'green')
+    cprint('Yellow color', 'yellow')
+    cprint('Blue color', 'blue')
+    cprint('Magenta color', 'magenta')
+    cprint('Cyan color', 'cyan')
+    cprint('White color', 'white')
+    print(('-' * 78))
+
+    print('Test highlights:')
+    cprint('On grey color', on_color='on_grey')
+    cprint('On red color', on_color='on_red')
+    cprint('On green color', on_color='on_green')
+    cprint('On yellow color', on_color='on_yellow')
+    cprint('On blue color', on_color='on_blue')
+    cprint('On magenta color', on_color='on_magenta')
+    cprint('On cyan color', on_color='on_cyan')
+    cprint('On white color', color='grey', on_color='on_white')
+    print('-' * 78)
+
+    print('Test attributes:')
+    cprint('Bold grey color', 'grey', attrs=['bold'])
+    cprint('Dark red color', 'red', attrs=['dark'])
+    cprint('Underline green color', 'green', attrs=['underline'])
+    cprint('Blink yellow color', 'yellow', attrs=['blink'])
+    cprint('Reversed blue color', 'blue', attrs=['reverse'])
+    cprint('Concealed Magenta color', 'magenta', attrs=['concealed'])
+    cprint('Bold underline reverse cyan color', 'cyan',
+            attrs=['bold', 'underline', 'reverse'])
+    cprint('Dark blink concealed white color', 'white',
+            attrs=['dark', 'blink', 'concealed'])
+    print(('-' * 78))
+
+    print('Test mixing:')
+    cprint('Underline red on grey color', 'red', 'on_grey',
+            ['underline'])
+    cprint('Reversed green on red color', 'green', 'on_red', ['reverse'])
+

plugins/bedtools/README.md

@@ -0,0 +1,5 @@
+# Bedtools plugin
+
+This plugin adds support for the [bedtools suite](http://bedtools.readthedocs.org/en/latest/):
+
+* Adds autocomplete options for all bedtools sub commands.