Expose max_frag_len parameter at class level and per-alignment level #174
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Thanks! I have merged your PR, but probably it would be better to expose a full |
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This is quite useful to me when aligning assembled ends of large inserts. The fist commit exposes this parameter in the Aligner class, so you can set this instance-wide. The second commit allows changing the max size per alignment, which I find useful as often I know the fragment size that I'm expecting for a particular set of assembled ends.