overwrite problematic deps (#236) #222
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| name: Linux Tests | |
| on: | |
| push: | |
| branches: [ master ] | |
| tags: ['v*'] | |
| pull_request: | |
| branches: [ master ] | |
| release: | |
| types: [published] | |
| jobs: | |
| build_and_test: | |
| if: "github.repository == 'libamtrack/library' && !contains(github.event.head_commit.message, '[ci skip]') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| name: Compile and test library | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: install necessary packages | |
| run: sudo apt-get -y install libgsl-dev | |
| - name: compile and install | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -DCMAKE_BUILD_TYPE=Release ../ -DCMAKE_INSTALL_PREFIX=$HOME/usr | |
| cmake --build . --target install -- -j | |
| - name: tests | |
| run: | | |
| LD_LIBRARY_PATH=$HOME/usr/lib $HOME/usr/bin/amtrack_test | |
| LD_LIBRARY_PATH=$HOME/usr/lib $HOME/usr/bin/amtrack_demo | |
| javascript_package: | |
| if: "github.repository == 'libamtrack/library' && !contains(github.event.head_commit.message, '[ci skip]') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| runs-on: ubuntu-latest | |
| needs: [build_and_test] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: mymindstorm/setup-emsdk@v12 | |
| - name: Cache compiled GSL | |
| uses: actions/cache@v4 | |
| env: | |
| cache-name: cache-node-modules | |
| with: | |
| path: $HOME/usr | |
| key: ${{ runner.os }}-build-${{ env.cache-name }}-${{ hashFiles('**/main.yml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-build-${{ env.cache-name }}- | |
| ${{ runner.os }}-build- | |
| ${{ runner.os }}- | |
| - name: Compile GSL | |
| run: | | |
| wget -q "http://ftpmirror.gnu.org/gnu/gsl/gsl-latest.tar.gz" | |
| mkdir $HOME/gsl-latest | |
| tar -xzf gsl-latest.tar.gz -C $HOME/gsl-latest | |
| mv $HOME/gsl-latest/** $HOME/gsl-latest/gsl | |
| mkdir $HOME/usr | |
| cd $HOME/gsl-latest/gsl/ && emconfigure ./configure --prefix=$HOME/usr --disable-shared && emmake make -j && emmake make install | |
| ls -al $HOME/usr/lib/ | |
| - name: Compile libamtrack webassembly package | |
| run: | | |
| GSL_INCLUDE_DIRS=$HOME/usr/include GSL_LIBRARY=$HOME/usr/lib/libgsl.a GSL_CBLAS_LIBRARY=$HOME/usr/lib/libgslcblas.a ./compile_to_js.sh | |
| working-directory: distributions/JavaScript | |
| - name: 'Upload Artifact' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: wasm file | |
| path: | | |
| distributions/JavaScript/output/libat.wasm | |
| distributions/JavaScript/output/libat.js | |
| if-no-files-found: error | |
| retention-days: 5 | |
| python_package: | |
| if: "github.repository == 'libamtrack/library' && !contains(github.event.head_commit.message, '[ci skip]') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| name: Make and test python bindings | |
| runs-on: ubuntu-latest | |
| needs: [build_and_test] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| # Number of commits to fetch. 0 indicates all history for all branches and tags. | |
| # Default: 1 | |
| fetch-depth: '0' | |
| - name: make python package | |
| run: sudo ./make_wheel_package.sh | |
| working-directory: distributions/Python/pyamtrack | |
| - name: test python package | |
| run: sudo ./test_wheel_package.sh | |
| working-directory: distributions/Python/pyamtrack | |
| - name: check generated files | |
| run: ls -alh distributions/Python/pyamtrack/generated/dist/wheelhouse/ | |
| - name: publish package to pypi | |
| uses: pypa/gh-action-pypi-publish@v1.8.14 | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') | |
| with: | |
| password: ${{ secrets.TWINE_PASSWORD }} | |
| repository_url: "https://upload.pypi.org/legacy/" | |
| packages_dir: distributions/Python/pyamtrack/generated/dist/wheelhouse/ | |
| verbose: true | |
| r_package: | |
| if: "github.repository == 'libamtrack/library' && !contains(github.event.head_commit.message, '[ci skip]') && !contains(github.event.head_commit.message, '[skip ci]')" | |
| runs-on: ubuntu-latest | |
| needs: [build_and_test] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.11 | |
| - name: install deps | |
| run: | | |
| sudo apt-get install -y r-base-core libgsl-dev | |
| pip install -r distributions/R/generator/requirements.txt | |
| pip install "robotpy-cppheaderparser==5.1.1" | |
| - name: make R package source | |
| run: | | |
| python generator/scripts/header_parser.py --namespace ./NAMESPACE --out-dir ./out/ libamtrack "../../include/*.h" | |
| python generator/scripts/prepare.py --desc-path ./DESCRIPTION --version 0.12.0 --out-dir ./out ../../include ../../src | |
| working-directory: distributions/R | |
| - name: install R deps | |
| run: | | |
| sudo R --vanilla -e 'install.packages("roxygen2", repos="http://cran.us.r-project.org")' | |
| sudo R --vanilla -e 'install.packages("pkgbuild", repos="http://cran.us.r-project.org")' | |
| - name: install R binary package | |
| run: | | |
| R --vanilla -e 'setwd("out"); roxygen2::roxygenise(load_code = "source")' | |
| R --vanilla -e 'setwd("out"); pkgbuild::build(binary = TRUE, needs_compilation = TRUE)' | |
| working-directory: distributions/R | |
| - name: test R binary package | |
| run: | | |
| sudo R --vanilla -e 'install.packages("libamtrack_0.12.0_R_x86_64-pc-linux-gnu.tar.gz")' | |
| R --vanilla -e 'library(libamtrack); AT.beta.from.E.single(60)' | |
| working-directory: distributions/R | |
| - name: 'Upload Artifact' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: R package | |
| path: distributions/R/libamtrack_0.12.0_R_x86_64-pc-linux-gnu.tar.gz | |
| if-no-files-found: error | |
| retention-days: 5 |