Python implementation based on the work of Tustison et al. This script uses ANTs. The Example data is lifted from the registration example of Tustison.

Example:

./ct_lung_registration.py -f sample_data/N25E_resampled.nii.gz \
                          -m sample_data/N25I_resampled.nii.gz

runtime: 14.5 minutes

Requirements

• Python (2 or 3)
• ANTs (testetd with 2.3.1)
• nibabel
• scipy
• skimage