Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[RFC] AtenEmbeddingBagPaddingIdxOp #1102

Closed
vidsinghal opened this issue Jul 22, 2022 · 3 comments
Closed

[RFC] AtenEmbeddingBagPaddingIdxOp #1102

vidsinghal opened this issue Jul 22, 2022 · 3 comments
Assignees

Comments

@vidsinghal
Copy link
Collaborator

vidsinghal commented Jul 22, 2022

Hello, I implemented the logic for the "sum" mode which required me to use the linalg::GenericOp.
After having a discussion with @ramiro050 in office hours we came to a conclusion to request an RFC in order to make sure this is the correct way to implement the Op.
This is what a high level python implementation of the sum mode looks like

import numpy as np

weight = [[1, 3, 5, 3],
                [3, 4, 2, 1],
                [2, 2, 3, 2],
                [0, 4, 2, 1],]

indices = [0, 2, 3, 1, 2, 3, 2, 1, 0, 1]

offsets = [0, 3, 5]

embedding_size = len(weight[0])
indices_shape    = len(indices)
offsets_shape    = len(offsets)

# add the size of the indices shape as a last offset
# this will avoid additional control flow inside the for loop. 
offsets.append(indices_shape)

#convert to numpy arrays
weight = np.array(weight)
indices = np.array(indices)
offsets = np.array(offsets)

output_tensor = np.zeros( (offsets_shape, embedding_size) )

for i in range(offsets_shape):
    for j in range(indices_shape):   
        for k in range(embedding_size):
            if(offsets[i] <= j and j < offsets[i+1]):
                output_tensor[i][k] = output_tensor[i][k] + weight[indices[j]][k]
            else:
                break

I also have a WIP branch for implementing the AtenEmbeddingBagPaddingIdxOp here: #1066
I have implemented the sum mode here using the GenericOp.

@ramiro050
Copy link
Collaborator

@silvasean, the main concern here is that for every element in the offsets tensor, the entire output_tensor gets iterated over. Do you know if there is a different approach using something like TMTensor dialect to create a more efficient implementation?

@silvasean
Copy link
Contributor

@silvasean, the main concern here is that for every element in the offsets tensor, the entire output_tensor gets iterated over. Do you know if there is a different approach using something like TMTensor dialect to create a more efficient implementation?

Not off the top of my head (we whiteboarded some stuff but putting it into a working code is beyond what I have in cache right now). Can you look into what ATen does to implement this op? Happy to dig in further if that doesn't yield anything.

qedawkins pushed a commit to nod-ai/torch-mlir that referenced this issue Oct 3, 2022
Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
qedawkins pushed a commit to nod-ai/torch-mlir that referenced this issue Oct 3, 2022
* Add check-onnx-backend to Mac CI. (llvm#1069)

* Add check-onnx-backend to Mac CI.

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Additional Docker help and split README for easier reading (llvm#1084)

* initial docker documentation

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* split README with no redundant place for info

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* respond to suggestions

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* specify that onnx-mlir.py script generates only code suitable to be exec in Linux and/or Docker env

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* fix checkdocs

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* responded to review suggestion on onnx-mlir --help

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* use ONNX-MLIR everywhere

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* add verify for concat

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* check all inputs

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Support filtering out lit tests based on targets (llvm#1087)

Currently we ignore what targets llvm was built for in the lit tests, but recent changes to onnx-mlir explicitly initialize the available targets.
This makes the corresponding change to the lit configuration, so that we can filter out the lit tests based on the available targets.

Signed-off-by: Stella Stamenova <stilis@microsoft.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Switch URLs to use main instead of master (llvm#1094)

Signed-off-by: Charles Volzka <cjvolzka@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Fix MacOS build badge (llvm#1092)

Signed-off-by: Gong Su <gong_su@hotmail.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* onnx-mlir.py warning about binary output (.so and .jar) (llvm#1090)

not directly usable if host is not Linux

Signed-off-by: Gong Su <gong_su@hotmail.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Make the doc example obey ONNX_MLIR_BUILD_TESTS (llvm#1083)

* Make the doc example obey ONNX_MLIR_BUILD_TESTS

Currently, ONNX_MLIR_BUILD_TESTS controls EXCLUDE_FROM_ALL, however, the targets added through add_executable will always build. We follow the llvm pattern and explicitly set EXCLUDE_FROM_ALL in the add_onnx_mlir_executable function if it is set for the directory, so that add_executable targets don't always build.

Signed-off-by: Stella Stamenova <stilis@microsoft.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Explicitly install into lib on all systems (llvm#1088)

Signed-off-by: Gong Su <gong_su@hotmail.com>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* add check (llvm#1098)

Signed-off-by: Tong Chen <chentong@us.ibm.com>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* fix typos and add ssh-client to dockerfile (llvm#1096)

* fix typos and add ssh-client to dockerfile

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* sync doc and script

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Emit print statement only when the verbose option is in effect. (llvm#1097)

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* format & refine code by request

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Support older versions 6, 11, 12 for Clip Op (llvm#1100)

Signed-off-by: Tung D. Le <tung@jp.ibm.com>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* using front to get first input

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* add 3 lit test for concat  verifier

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* add newline

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Add check-onnx-backend to Mac CI. (llvm#1069)

* Add check-onnx-backend to Mac CI.

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Additional Docker help and split README for easier reading (llvm#1084)

* initial docker documentation

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* split README with no redundant place for info

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* update

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* respond to suggestions

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* specify that onnx-mlir.py script generates only code suitable to be exec in Linux and/or Docker env

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* fix checkdocs

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* responded to review suggestion on onnx-mlir --help

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>

* use ONNX-MLIR everywhere

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Switch URLs to use main instead of master (llvm#1094)

Signed-off-by: Charles Volzka <cjvolzka@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Fix MacOS build badge (llvm#1092)

Signed-off-by: Gong Su <gong_su@hotmail.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* fix typos and add ssh-client to dockerfile (llvm#1096)

* fix typos and add ssh-client to dockerfile

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* sync doc and script

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Update document (llvm#1077)

* create

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* delete HowTOAddAnOperation.md

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* modify testing

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* create

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* delete HowTOAddAnOperation.md

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* modify testing

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* fix

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* create

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* add comment

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* delete HowTOAddAnOperation.md

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* modify testing

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* fix

Signed-off-by: Tong Chen <chentong@us.ibm.com>

* create

Signed-off-by: Tong Chen <chentong@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Update LLVM level (llvm#1095)

* Update LLVM level to 700997aef8c1f2f08c9ac5fca61650b57a01e8b1

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Pass a type converter to all ONNX operations. (llvm#1102)

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Nuke KrnlDummyCastOp now that we use MLIR's UnrealizedConversionCastOp (llvm#1103)

* Nuke KrnlDummyCastOp now that we use MLIR's UnrealizedConversionCastOp

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>

* Remove a dependency in src/Dialect/Krnl/CMakeList.txt.  Regenerate docs via 'ninja onnx-mlir-docs'.

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Add --emitObj option to onnx-mlir (llvm#1104)

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* fix warnings (llvm#1093)

Signed-off-by: Ian Bearman <ianb@microsoft.com>

Co-authored-by: Stella Stamenova <stilis@microsoft.com>
Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Add -march option to onnx-mlir (llvm#1107)

Signed-off-by: Ettore Tiotto <etiotto@ca.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Fix Doc spelling and broken links, removed warnings about using main (llvm#1106)

* removed warning about main vs master in CONTRIBUTING, fixed links and spelling mistakes

Signed-off-by: Alexandre Eichenberger <alexe@us.ibm.com>
Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

* Update BuildONNX.md

Signed-off-by: Ethan Wang <ywan2928@uwo.ca>

Co-authored-by: Ettore Tiotto <etiotto@ca.ibm.com>
Co-authored-by: Alexandre Eichenberger <alexe@us.ibm.com>
Co-authored-by: Stella Stamenova <stilis@microsoft.com>
Co-authored-by: Charles Volzka <42243335+cjvolzka@users.noreply.github.com>
Co-authored-by: gongsu832 <gong_su@hotmail.com>
Co-authored-by: chentong319 <chentong@us.ibm.com>
Co-authored-by: Tung D. Le <tung@jp.ibm.com>
Co-authored-by: Ian Bearman <ian.bearman@live.com>
@silvasean
Copy link
Contributor

This appears to have been implemented in b70548e ed13ebf

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

4 participants