DOC Update install versions

docs/sources/install.md

@@ -1,67 +1,39 @@
 # Installation
 
-
 ## Bioconda (binary)
 
 The recommended way to install NGLess is through
 [bioconda](http://bioconda.github.io):
 
     conda install -c bioconda ngless 
 
+This will install the most recent released version
+
 ### Docker
 
 Alternatively, a docker container with NGLess is available at
-[biocontainers](https://quay.io/repository/biocontainers/ngless):
+[docker hub](https://hub.docker.com/r/nglesstoolkit/ngless):
 
-    docker run -v $PWD:/workdir -w /workdir -it quay.io/biocontainers/ngless:0.6.1--py35_0 ngless --version
+    docker run -v $PWD:/workdir -w /workdir -it nglesstoolkit/ngless:1.4.0-beta1 ngless --version
 
-Adapt the mount flags (``-v``) as needed.
+Adapt the mount flags (``-v``) as needed. You can use the `latest` tag to get a
+more up to date version as well.
 
 
 ## Linux (binary)
 
-You can get a [statically linked version of NGless
-1.1.1](https://github.com/ngless-toolkit/ngless/releases/download/v1.1.1/NGLess-1.1.1-static-Linux64)
-or a [nighly build of the latest development
-code](https://gitlab.com/ngless/ngless/builds/artifacts/master/raw/bin/ngless?job=build-and-test-ubuntu).
+You can download a [statically linked version of NGless
+1.4.0-beta](https://github.com/ngless-toolkit/ngless/releases/download/v1.4.0-beta1/ngless-v1.4.0-beta1-static)
+
 This should work across a wide range of Linux versions (please
 [report](https://github.com/ngless-toolkit/ngless/issues) any issues you encounter):
 
-    curl -L -O https://github.com/ngless-toolkit/ngless/releases/download/v1.1.1/NGLess-1.1.1-static-Linux64
-    chmod +x NGLess-1.1.1-static-Linux64
-    ./NGLess-1.1.1-static-Linux64
-
-This download bundles bwa, samtools and megahit (also statically linked).
-
-If you want to try one of ngless' builtin modules (motus, specI, ...) you can
-download [the full nighly build zip
-file](https://gitlab.com/ngless/ngless/builds/artifacts/master/download?job=build-and-test-ubuntu)
-which includes them.
-
-
-## Windows
-
-NGLess [cannot currently compile on
-Windows](https://github.com/ngless-toolkit/ngless/issues/39).
+    curl -L -O https://github.com/ngless-toolkit/ngless/releases/download/v1.4.0-beta1/ngless-v1.4.0-beta1-static
+    chmod +x ngless-v1.4.0-beta1-static
+    ./ngless-v1.4.0-beta1-static
 
-<!--
+This downloaded file bundles bwa, samtools and megahit (also statically linked).
 
-Download and run the [Windows
-Installer](https://ngless.embl.de/releases/ngless-0.5.1-Windows.exe)
-The result is a command line utility, so you need to run it on the command
-line. After running the installer, typing `ngless` on the terminal should work
-as the installer will add the right directories to the path variable; you may
-have to start a new terminal, though. It should also work under Cygwin (but
-Cygwin is **not** a dependency).
-
-The Windows package includes [bwa](http://bio-bwa.sourceforge.net/) and
-[samtools](http://www.htslib.org/). The bwa and samtools executables are
-available as `ngless-0.5.1-bwa` and `ngless-0.5.1-samtools`, respectively.  It
-has been tested on Windows 10, but this has not had as intensitive testing as
-the Linux/Mac OS X versions so any [bug
-reports](https://github.com/ngless-toolkit/ngless/issues) are appreciated.
-
--->
 
 ## From source
 
@@ -79,22 +51,6 @@ The following sequence of commands should download and build the software
 The first time you run this, it will take a while as it will download all
 dependencies. After this ngless is ready to use!
 
-## With Nix
-
-If you use [nix](https://nixos.org), you can easily build and install ngless
-using it (these scripts also install all necessary dependencies):
-
-    nix-env -i -f https://github.com/luispedro/ngless-nix/archive/master.tar.gz
-
-This should download the nix scripts and build ngless.
-
-If you prefer, you can also first clone the repository:
-
-    git clone https://github.com/luispedro/ngless-nix
-    cd ngless-nix
-    # inspect the default.nix & ngless.nix files if you wish
-    nix-env -i -f .
-
 ## Make targets
 
 The following are targets in the Makefile.