This repository contains data and R code accompanying article 10.1002/aqc.3814 in Aquatic Conservation: Marine and Freshwater Ecosystems in the shape of a single dataframe (DIMRS.csv) and a corresponding R script (DIMRS.R), along with the published Manuscript.pdf, Supplement.pdf and Figures. The dataframe is arranged in tidy format, meaning columns are variables and rows are replicates, and has the variables
- lat = categorical latitude with levels "North" and "South"
- lon = categorical longitude with levels "East" and "West"
- site = site name ("Manta", "Tabon", "Moray" and "Bamboo")
- depth = categorical depth with levels "Shallow" and "Deep"
- HC = hard (scleractinian) coral (%)
- NIA = nutrient indicator (turf) algae (%)
- RC = rock (%)
- RB = rubble (%)
- SD = sand (%)
- SI = silt (%)
- SC = soft coral (%)
- SP = sponge (%)
- OT = other, e.g. anemone, giant clam etc. (%)
- TR = trash, e.g. plastic litter (%)
- LC = live coral (% of hard coral)
- DC = dead coral (% of hard coral)
- RKC = recenly killed coral (% of hard coral)
- DIS = diseased coral (% of hard coral)
- FBL = fully bleached coral (% of hard coral)
- PBL = partially bleached coral (% of hard coral)
- M = massive growth morphology (% of hard coral)
- SM = submassive growth morphology (% of hard coral)
- C = corymbose growth morphology (% of hard coral)
- B = branching growth morphology (% of hard coral)
- D = digitate growth morphology (% of hard coral)
- L = laminar growth morphology (% of hard coral)
- F = foliose growth morphology (% of hard coral)
- S = solitary growth morphology (% of hard coral)
- E = encrusting growth morphology (% of hard coral)
- T = tabular growth morphology (% of hard coral)
Luka Seamus Wright, 10 March 2022