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KSkwarczynski committed Dec 16, 2024
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CovarianceBase
==============

.. currentmodule:: pyMaCh3._pyMaCh3.covariance

.. autoclass:: CovarianceBase
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~CovarianceBase.calculate_likelihood
~CovarianceBase.get_fancy_par_name
~CovarianceBase.get_internal_par_name
~CovarianceBase.get_n_pars
~CovarianceBase.get_proposal_array
~CovarianceBase.propose_step
~CovarianceBase.throw_par_prop

.. rubric:: Methods Documentation

.. automethod:: calculate_likelihood
.. automethod:: get_fancy_par_name
.. automethod:: get_internal_par_name
.. automethod:: get_n_pars
.. automethod:: get_proposal_array
.. automethod:: propose_step
.. automethod:: throw_par_prop
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CovarianceOsc
=============

.. currentmodule:: pyMaCh3._pyMaCh3.covariance

.. autoclass:: CovarianceOsc
:show-inheritance:
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CovarianceXsec
==============

.. currentmodule:: pyMaCh3._pyMaCh3.covariance

.. autoclass:: CovarianceXsec
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~CovarianceXsec.get_nominal_par_values
~CovarianceXsec.get_par_spline_name
~CovarianceXsec.get_par_spline_type
~CovarianceXsec.get_par_type

.. rubric:: Methods Documentation

.. automethod:: get_nominal_par_values
.. automethod:: get_par_spline_name
.. automethod:: get_par_spline_type
.. automethod:: get_par_type
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SystematicType
==============

.. currentmodule:: pyMaCh3._pyMaCh3.covariance

.. autoclass:: SystematicType
:show-inheritance:

.. rubric:: Attributes Summary

.. autosummary::

~SystematicType.Functional
~SystematicType.N_Systematic_Types
~SystematicType.Normalisation
~SystematicType.Spline
~SystematicType.name
~SystematicType.value

.. rubric:: Attributes Documentation

.. autoattribute:: Functional
.. autoattribute:: N_Systematic_Types
.. autoattribute:: Normalisation
.. autoattribute:: Spline
.. autoattribute:: name
.. autoattribute:: value
33 changes: 33 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.fitter.FitterBase.rst.txt
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FitterBase
==========

.. currentmodule:: pyMaCh3._pyMaCh3.fitter

.. autoclass:: FitterBase
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~FitterBase.add_sample_PDF
~FitterBase.add_syst_object
~FitterBase.drag_race
~FitterBase.get_name
~FitterBase.get_step_scale_from_LLH_scan
~FitterBase.run
~FitterBase.run_2d_LLH_scan
~FitterBase.run_LLH_scan
~FitterBase.run_sigma_var

.. rubric:: Methods Documentation

.. automethod:: add_sample_PDF
.. automethod:: add_syst_object
.. automethod:: drag_race
.. automethod:: get_name
.. automethod:: get_step_scale_from_LLH_scan
.. automethod:: run
.. automethod:: run_2d_LLH_scan
.. automethod:: run_LLH_scan
.. automethod:: run_sigma_var
19 changes: 19 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.fitter.LikelihoodFit.rst.txt
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LikelihoodFit
=============

.. currentmodule:: pyMaCh3._pyMaCh3.fitter

.. autoclass:: LikelihoodFit
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~LikelihoodFit.caluclate_chi2
~LikelihoodFit.get_n_params

.. rubric:: Methods Documentation

.. automethod:: caluclate_chi2
.. automethod:: get_n_params
19 changes: 19 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.fitter.MCMC.rst.txt
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MCMC
====

.. currentmodule:: pyMaCh3._pyMaCh3.fitter

.. autoclass:: MCMC
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~MCMC.set_chain_length
~MCMC.set_init_step_num

.. rubric:: Methods Documentation

.. automethod:: set_chain_length
.. automethod:: set_init_step_num
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MinuitFit
=========

.. currentmodule:: pyMaCh3._pyMaCh3.fitter

.. autoclass:: MinuitFit
:show-inheritance:
17 changes: 17 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.fitter.PSO.rst.txt
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PSO
===

.. currentmodule:: pyMaCh3._pyMaCh3.fitter

.. autoclass:: PSO
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~PSO.init

.. rubric:: Methods Documentation

.. automethod:: init
21 changes: 21 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.manager.Manager.rst.txt
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Manager
=======

.. currentmodule:: pyMaCh3._pyMaCh3.manager

.. autoclass:: Manager
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~Manager.get_test_stat
~Manager.print
~Manager.raw

.. rubric:: Methods Documentation

.. automethod:: get_test_stat
.. automethod:: print
.. automethod:: raw
29 changes: 29 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.manager.NodeType.rst.txt
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NodeType
========

.. currentmodule:: pyMaCh3._pyMaCh3.manager

.. autoclass:: NodeType
:show-inheritance:

.. rubric:: Attributes Summary

.. autosummary::

~NodeType.Map
~NodeType.Null
~NodeType.Scalar
~NodeType.Sequence
~NodeType.Undefined
~NodeType.name
~NodeType.value

.. rubric:: Attributes Documentation

.. autoattribute:: Map
.. autoattribute:: Null
.. autoattribute:: Scalar
.. autoattribute:: Sequence
.. autoattribute:: Undefined
.. autoattribute:: name
.. autoattribute:: value
19 changes: 19 additions & 0 deletions pyMaCh3/_sources/api/pyMaCh3._pyMaCh3.manager.YamlNode.rst.txt
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YamlNode
========

.. currentmodule:: pyMaCh3._pyMaCh3.manager

.. autoclass:: YamlNode
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~YamlNode.data
~YamlNode.type

.. rubric:: Methods Documentation

.. automethod:: data
.. automethod:: type
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InputManager
============

.. currentmodule:: pyMaCh3._pyMaCh3.plotting

.. autoclass:: InputManager
:show-inheritance:

.. rubric:: Methods Summary

.. autosummary::

~InputManager.get_1d_posterior
~InputManager.get_MCMC_entry
~InputManager.get_MCMC_value
~InputManager.get_enabled_llh
~InputManager.get_enabled_llh_by_sample
~InputManager.get_known_1d_posterior_parameters
~InputManager.get_known_MCMC_parameters
~InputManager.get_known_llh_parameters
~InputManager.get_known_llh_samples
~InputManager.get_known_parameters
~InputManager.get_known_post_fit_parameters
~InputManager.get_known_samples
~InputManager.get_llh_scan
~InputManager.get_llh_scan_by_sample
~InputManager.get_n_MCMC_entries
~InputManager.get_n_input_files
~InputManager.get_post_fit_error
~InputManager.get_post_fit_value
~InputManager.get_tagged_parameters
~InputManager.get_tagged_samples
~InputManager.print

.. rubric:: Methods Documentation

.. automethod:: get_1d_posterior
.. automethod:: get_MCMC_entry
.. automethod:: get_MCMC_value
.. automethod:: get_enabled_llh
.. automethod:: get_enabled_llh_by_sample
.. automethod:: get_known_1d_posterior_parameters
.. automethod:: get_known_MCMC_parameters
.. automethod:: get_known_llh_parameters
.. automethod:: get_known_llh_samples
.. automethod:: get_known_parameters
.. automethod:: get_known_post_fit_parameters
.. automethod:: get_known_samples
.. automethod:: get_llh_scan
.. automethod:: get_llh_scan_by_sample
.. automethod:: get_n_MCMC_entries
.. automethod:: get_n_input_files
.. automethod:: get_post_fit_error
.. automethod:: get_post_fit_value
.. automethod:: get_tagged_parameters
.. automethod:: get_tagged_samples
.. automethod:: print
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