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KSkwarczynski committed Jul 23, 2024
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2 changes: 1 addition & 1 deletion CovarianceUtils_8h_source.html
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<div class="line"><a id="l00119" name="l00119"></a><span class="lineno"> 119</span> </div>
<div class="line"><a id="l00120" name="l00120"></a><span class="lineno"> 120</span>}</div>
<div class="ttc" id="aYamlHelper_8h_html_a1a6adcb8b24bfbdcb936ced6812e1b0c"><div class="ttname"><a href="YamlHelper_8h.html#a1a6adcb8b24bfbdcb936ced6812e1b0c">GetFromManager</a></div><div class="ttdeci">Type GetFromManager(const YAML::Node &amp;node, Type defval)</div><div class="ttdoc">Get content of config file if node is not found take default value specified.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00018">YamlHelper.h:18</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html"><div class="ttname"><a href="namespaceMaCh3Utils.html">MaCh3Utils</a></div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00003">Monitor.cpp:3</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html"><div class="ttname"><a href="namespaceMaCh3Utils.html">MaCh3Utils</a></div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00008">Monitor.cpp:8</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a0cd7bf76aca73a1e36519b04e19dd6c0"><div class="ttname"><a href="namespaceMaCh3Utils.html#a0cd7bf76aca73a1e36519b04e19dd6c0">MaCh3Utils::MatrixMult</a></div><div class="ttdeci">double * MatrixMult(double *A, double *B, int n)</div><div class="ttdoc">CW: Multi-threaded matrix multiplication.</div><div class="ttdef"><b>Definition</b> <a href="CovarianceUtils_8h_source.html#l00044">CovarianceUtils.h:44</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5aff908b9241c673e8d05403996e2229"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5aff908b9241c673e8d05403996e2229">MaCh3Utils::GetNThreads</a></div><div class="ttdeci">int GetNThreads()</div><div class="ttdoc">number of threads which we need for example for TRandom3</div><div class="ttdef"><b>Definition</b> <a href="CovarianceUtils_8h_source.html#l00032">CovarianceUtils.h:32</a></div></div>
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2 changes: 1 addition & 1 deletion DiagMCMC_8cpp.html
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Expand Up @@ -147,7 +147,7 @@ <h2 class="memtitle"><span class="permalink"><a href="#a73b9fcbb4ef23d61a60d3a6c
<div class="ttc" id="aGetPostfitParamPlots_8cpp_html_a01d92a800904faa16b8c1c1372c40fb3"><div class="ttname"><a href="GetPostfitParamPlots_8cpp.html#a01d92a800904faa16b8c1c1372c40fb3">config</a></div><div class="ttdeci">YAML::Node config</div><div class="ttdef"><b>Definition</b> <a href="GetPostfitParamPlots_8cpp_source.html#l00030">GetPostfitParamPlots.cpp:30</a></div></div>
<div class="ttc" id="aMaCh3Logger_8h_html_a95fa4dffc648e4c5536c9292c2bdcac3"><div class="ttname"><a href="MaCh3Logger_8h.html#a95fa4dffc648e4c5536c9292c2bdcac3">MACH3LOG_INFO</a></div><div class="ttdeci">#define MACH3LOG_INFO</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Logger_8h_source.html#l00013">MaCh3Logger.h:13</a></div></div>
<div class="ttc" id="aYamlHelper_8h_html_a1a6adcb8b24bfbdcb936ced6812e1b0c"><div class="ttname"><a href="YamlHelper_8h.html#a1a6adcb8b24bfbdcb936ced6812e1b0c">GetFromManager</a></div><div class="ttdeci">Type GetFromManager(const YAML::Node &amp;node, Type defval)</div><div class="ttdoc">Get content of config file if node is not found take default value specified.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00018">YamlHelper.h:18</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00066">MCMCProcessor.h:66</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00061">MCMCProcessor.h:61</a></div></div>
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2 changes: 1 addition & 1 deletion DiagMCMC_8cpp_source.html
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<div class="ttc" id="aMaCh3Logger_8h_html_a95fa4dffc648e4c5536c9292c2bdcac3"><div class="ttname"><a href="MaCh3Logger_8h.html#a95fa4dffc648e4c5536c9292c2bdcac3">MACH3LOG_INFO</a></div><div class="ttdeci">#define MACH3LOG_INFO</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Logger_8h_source.html#l00013">MaCh3Logger.h:13</a></div></div>
<div class="ttc" id="aMaCh3Logger_8h_html_aa603c55ea73cd86d1994901227883e1e"><div class="ttname"><a href="MaCh3Logger_8h.html#aa603c55ea73cd86d1994901227883e1e">SetMaCh3LoggerFormat</a></div><div class="ttdeci">void SetMaCh3LoggerFormat()</div><div class="ttdoc">Set messaging format of the logger.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Logger_8h_source.html#l00020">MaCh3Logger.h:20</a></div></div>
<div class="ttc" id="aYamlHelper_8h_html_a1a6adcb8b24bfbdcb936ced6812e1b0c"><div class="ttname"><a href="YamlHelper_8h.html#a1a6adcb8b24bfbdcb936ced6812e1b0c">GetFromManager</a></div><div class="ttdeci">Type GetFromManager(const YAML::Node &amp;node, Type defval)</div><div class="ttdoc">Get content of config file if node is not found take default value specified.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00018">YamlHelper.h:18</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00066">MCMCProcessor.h:66</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00061">MCMCProcessor.h:61</a></div></div>
<div class="ttc" id="aclassMaCh3Exception_html"><div class="ttname"><a href="classMaCh3Exception.html">MaCh3Exception</a></div><div class="ttdoc">Custom exception class for MaCh3 errors.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Exception_8h_source.html#l00010">MaCh3Exception.h:10</a></div></div>
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6 changes: 3 additions & 3 deletions FitterBase_8cpp_source.html
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<div class="ttc" id="aclassFitterBase_html_aed2032b9c4a4f2248abe548f54f8dcc8"><div class="ttname"><a href="classFitterBase.html#aed2032b9c4a4f2248abe548f54f8dcc8">FitterBase::outTree</a></div><div class="ttdeci">TTree * outTree</div><div class="ttdoc">Output tree with posteriors.</div><div class="ttdef"><b>Definition</b> <a href="FitterBase_8h_source.html#l00144">FitterBase.h:144</a></div></div>
<div class="ttc" id="aclassFitterBase_html_aedd882d8e4d0da0f89cf94e3a008affe"><div class="ttname"><a href="classFitterBase.html#aedd882d8e4d0da0f89cf94e3a008affe">FitterBase::save_nominal</a></div><div class="ttdeci">bool save_nominal</div><div class="ttdoc">save nominal matrix info or not</div><div class="ttdef"><b>Definition</b> <a href="FitterBase_8h_source.html#l00151">FitterBase.h:151</a></div></div>
<div class="ttc" id="aclassFitterBase_html_afac0dcceb1df194159c07945e8dc0069"><div class="ttname"><a href="classFitterBase.html#afac0dcceb1df194159c07945e8dc0069">FitterBase::samples</a></div><div class="ttdeci">std::vector&lt; samplePDFBase * &gt; samples</div><div class="ttdoc">Sample holder.</div><div class="ttdef"><b>Definition</b> <a href="FitterBase_8h_source.html#l00117">FitterBase.h:117</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00066">MCMCProcessor.h:66</a></div></div>
<div class="ttc" id="aclassMCMCProcessor_html"><div class="ttname"><a href="classMCMCProcessor.html">MCMCProcessor</a></div><div class="ttdoc">Class responsible for processing MCMC chains, performing diagnostics, generating plots,...</div><div class="ttdef"><b>Definition</b> <a href="MCMCProcessor_8h_source.html#l00061">MCMCProcessor.h:61</a></div></div>
<div class="ttc" id="aclassMaCh3Exception_html"><div class="ttname"><a href="classMaCh3Exception.html">MaCh3Exception</a></div><div class="ttdoc">Custom exception class for MaCh3 errors.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Exception_8h_source.html#l00010">MaCh3Exception.h:10</a></div></div>
<div class="ttc" id="aclassMaCh3Modes_html_abf4ac35511787907bc16ae26aa6c2a15"><div class="ttname"><a href="classMaCh3Modes.html#abf4ac35511787907bc16ae26aa6c2a15">MaCh3Modes::GetMaCh3ModeName</a></div><div class="ttdeci">std::string GetMaCh3ModeName(const int Index)</div><div class="ttdoc">KS: Get normal name of mode, if mode not known you will get UNKNOWN_BAD.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Modes_8cpp_source.html#l00124">MaCh3Modes.cpp:124</a></div></div>
<div class="ttc" id="aclassMaCh3Modes_html_af8a6f9baddc0a2b106e52eb71ce63aef"><div class="ttname"><a href="classMaCh3Modes.html#af8a6f9baddc0a2b106e52eb71ce63aef">MaCh3Modes::GetMode</a></div><div class="ttdeci">MaCh3Modes_t GetMode(std::string name)</div><div class="ttdoc">KS: Get mode number based on name, if mode not known you will get UNKNOWN_BAD.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Modes_8cpp_source.html#l00154">MaCh3Modes.cpp:154</a></div></div>
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<div class="ttc" id="aclassmanager_html_a297a81517f0a46bda90f42b211e42cf5"><div class="ttname"><a href="classmanager.html#a297a81517f0a46bda90f42b211e42cf5">manager::GetMaCh3Modes</a></div><div class="ttdeci">MaCh3Modes * GetMaCh3Modes() const</div><div class="ttdoc">Return pointer to MaCh3 modes.</div><div class="ttdef"><b>Definition</b> <a href="manager_8h_source.html#l00050">manager.h:50</a></div></div>
<div class="ttc" id="aclassmanager_html_ab3999cc856ede72b37f68bdb28bd5520"><div class="ttname"><a href="classmanager.html#ab3999cc856ede72b37f68bdb28bd5520">manager::raw</a></div><div class="ttdeci">YAML::Node const &amp; raw()</div><div class="ttdoc">Return config.</div><div class="ttdef"><b>Definition</b> <a href="manager_8h_source.html#l00048">manager.h:48</a></div></div>
<div class="ttc" id="aclasssamplePDFBase_html"><div class="ttname"><a href="classsamplePDFBase.html">samplePDFBase</a></div><div class="ttdoc">Class responsible for handling implementation of samples used in analysis, reweighting and returning ...</div><div class="ttdef"><b>Definition</b> <a href="samplePDFBase_8h_source.html#l00027">samplePDFBase.h:28</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a417b0bad440b7f273ca404ff25dd86a2"><div class="ttname"><a href="namespaceMaCh3Utils.html#a417b0bad440b7f273ca404ff25dd86a2">MaCh3Utils::getValue</a></div><div class="ttdeci">int getValue(std::string Type)</div><div class="ttdoc">CW: Get info like RAM.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00212">Monitor.cpp:212</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00188">Monitor.cpp:188</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a417b0bad440b7f273ca404ff25dd86a2"><div class="ttname"><a href="namespaceMaCh3Utils.html#a417b0bad440b7f273ca404ff25dd86a2">MaCh3Utils::getValue</a></div><div class="ttdeci">int getValue(std::string Type)</div><div class="ttdoc">CW: Get info like RAM.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00217">Monitor.cpp:217</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00193">Monitor.cpp:193</a></div></div>
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4 changes: 2 additions & 2 deletions GetPenaltyTerm_8cpp.html
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<div class="ttc" id="aGetPenaltyTerm_8cpp_html_ae7c3a438d4508eba7ac26e26135b2c17"><div class="ttname"><a href="GetPenaltyTerm_8cpp.html#ae7c3a438d4508eba7ac26e26135b2c17">isFlat</a></div><div class="ttdeci">std::vector&lt; bool &gt; isFlat</div><div class="ttdef"><b>Definition</b> <a href="GetPenaltyTerm_8cpp_source.html#l00039">GetPenaltyTerm.cpp:39</a></div></div>
<div class="ttc" id="aMaCh3Logger_8h_html_a95fa4dffc648e4c5536c9292c2bdcac3"><div class="ttname"><a href="MaCh3Logger_8h.html#a95fa4dffc648e4c5536c9292c2bdcac3">MACH3LOG_INFO</a></div><div class="ttdeci">#define MACH3LOG_INFO</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Logger_8h_source.html#l00013">MaCh3Logger.h:13</a></div></div>
<div class="ttc" id="aYamlHelper_8h_html_a1a6adcb8b24bfbdcb936ced6812e1b0c"><div class="ttname"><a href="YamlHelper_8h.html#a1a6adcb8b24bfbdcb936ced6812e1b0c">GetFromManager</a></div><div class="ttdeci">Type GetFromManager(const YAML::Node &amp;node, Type defval)</div><div class="ttdoc">Get content of config file if node is not found take default value specified.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00018">YamlHelper.h:18</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00188">Monitor.cpp:188</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00193">Monitor.cpp:193</a></div></div>
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<div class="line"><span class="lineno"> 396</span>}</div>
<div class="ttc" id="aMaCh3Logger_8h_html_a61052119a625282d0ec6d4a97adf3ee2"><div class="ttname"><a href="MaCh3Logger_8h.html#a61052119a625282d0ec6d4a97adf3ee2">MACH3LOG_ERROR</a></div><div class="ttdeci">#define MACH3LOG_ERROR</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Logger_8h_source.html#l00015">MaCh3Logger.h:15</a></div></div>
<div class="ttc" id="aYamlHelper_8h_html_a7e0ade2fd295a927676c243c97d0aa64"><div class="ttname"><a href="YamlHelper_8h.html#a7e0ade2fd295a927676c243c97d0aa64">TMacroToYAML</a></div><div class="ttdeci">YAML::Node TMacroToYAML(const TMacro &amp;macro)</div><div class="ttdoc">KS: Convert a ROOT TMacro object to a YAML node.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00144">YamlHelper.h:144</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_aaf39f873ebf93550a417418e583ebcf8"><div class="ttname"><a href="namespaceMaCh3Utils.html#aaf39f873ebf93550a417418e583ebcf8">MaCh3Utils::PrintConfig</a></div><div class="ttdeci">void PrintConfig(const YAML::Node &amp;node)</div><div class="ttdoc">KS: Print Yaml config using logger.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00274">Monitor.cpp:274</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_aaf39f873ebf93550a417418e583ebcf8"><div class="ttname"><a href="namespaceMaCh3Utils.html#aaf39f873ebf93550a417418e583ebcf8">MaCh3Utils::PrintConfig</a></div><div class="ttdeci">void PrintConfig(const YAML::Node &amp;node)</div><div class="ttdoc">KS: Print Yaml config using logger.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00279">Monitor.cpp:279</a></div></div>
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4 changes: 2 additions & 2 deletions GetPenaltyTerm_8cpp_source.html
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<div class="ttc" id="aYamlHelper_8h_html_a7e0ade2fd295a927676c243c97d0aa64"><div class="ttname"><a href="YamlHelper_8h.html#a7e0ade2fd295a927676c243c97d0aa64">TMacroToYAML</a></div><div class="ttdeci">YAML::Node TMacroToYAML(const TMacro &amp;macro)</div><div class="ttdoc">KS: Convert a ROOT TMacro object to a YAML node.</div><div class="ttdef"><b>Definition</b> <a href="YamlHelper_8h_source.html#l00144">YamlHelper.h:144</a></div></div>
<div class="ttc" id="aclassMaCh3Exception_html"><div class="ttname"><a href="classMaCh3Exception.html">MaCh3Exception</a></div><div class="ttdoc">Custom exception class for MaCh3 errors.</div><div class="ttdef"><b>Definition</b> <a href="MaCh3Exception_8h_source.html#l00010">MaCh3Exception.h:10</a></div></div>
<div class="ttc" id="amanager_8h_html"><div class="ttname"><a href="manager_8h.html">manager.h</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00188">Monitor.cpp:188</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_aaf39f873ebf93550a417418e583ebcf8"><div class="ttname"><a href="namespaceMaCh3Utils.html#aaf39f873ebf93550a417418e583ebcf8">MaCh3Utils::PrintConfig</a></div><div class="ttdeci">void PrintConfig(const YAML::Node &amp;node)</div><div class="ttdoc">KS: Print Yaml config using logger.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00274">Monitor.cpp:274</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_a5b63b3185a04cff2ea94e18e1831ce9e"><div class="ttname"><a href="namespaceMaCh3Utils.html#a5b63b3185a04cff2ea94e18e1831ce9e">MaCh3Utils::PrintProgressBar</a></div><div class="ttdeci">void PrintProgressBar(const int Done, const int All)</div><div class="ttdoc">KS: Simply print progress bar.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00193">Monitor.cpp:193</a></div></div>
<div class="ttc" id="anamespaceMaCh3Utils_html_aaf39f873ebf93550a417418e583ebcf8"><div class="ttname"><a href="namespaceMaCh3Utils.html#aaf39f873ebf93550a417418e583ebcf8">MaCh3Utils::PrintConfig</a></div><div class="ttdeci">void PrintConfig(const YAML::Node &amp;node)</div><div class="ttdoc">KS: Print Yaml config using logger.</div><div class="ttdef"><b>Definition</b> <a href="Monitor_8cpp_source.html#l00279">Monitor.cpp:279</a></div></div>
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