try to fix workflow build

marbl · Aug 9, 2024 · 78bcb76 · 78bcb76
1 parent 067e20e
commit 78bcb76
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/.github/workflows/makefile.yml b/.github/workflows/makefile.yml
@@ -42,6 +42,7 @@ jobs:
 
     - name: Install dependencies
       run: |
+        sudo apt-get update
         mamba install -c conda-forge -c bioconda 'python=3.11' 'pulp<=2.7.0' 'snakemake-minimal>7,<8' GraphAligner mashmap winnowmap
         sudo apt-get install libcurl4-openssl-dev
         pip install networkx