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  1. TF_binding_maize_leaf TF_binding_maize_leaf Public

    Repository to generate draft figures for the paper "Reconstructing the maize leaf regulatory network using ChIP-seq data of 104 transcription factors" The R_notebook folder includes text in line wi…

    HTML 1 1

  2. genomic_regulatory_kmers genomic_regulatory_kmers Public

    Reproducible training of machine learning models for functional genomics data.

    Python

  3. ZmTSSs_CAGE ZmTSSs_CAGE Public

    Several scripts required to analyze Maize CAGE data

    Python

  4. dockerR_template dockerR_template Public template

    Jupyter Notebook 1

  5. semantic_biovectors semantic_biovectors Public

    Deriving embeddings from biological sequences

    Jupyter Notebook 1 1