cleaned revisions

test/revision.jl

@@ -5,14 +5,26 @@ using PhysiologyPlotting
 PhysiologyPlotting.frontend
 import ElectroPhysiology.create_signal_waveform!
 #using Pkg; Pkg.activate("test")
-
 #%% Fixing GLMakie plotting
 root = raw"F:\Data\Patching"
 file = "2024_01_25_ChAT-RFP_DSGC/Cell1/24125005.abf"
 filename = joinpath(root, file)
 data = readABF(filename)
 create_signal_waveform!(data, "Cmd 0")
 
+#%%
+fig = Figure()
+ax1 = Axis(fig[1,1], ylabel = getChannelName(data, 1))
+ax2 = Axis(fig[2,1], xlabel = "Time (ms)", ylabel = getChannelName(data, 2))
+experimentplot!(ax1, data, channel = 1)
+experimentplot!(ax2, data, channel = 2)
+display(fig)
+
+#%%
+PhysiologyPlotting.__init__()
+fig, axs = experimentplot(data)
+display(fig)
+#%%
 f = Figure(size = (4000, 5000))
 ax1 = Axis(f[1,1], 
      xlabel = "Time (ms)", 
@@ -28,54 +40,4 @@ line_arr = plot_experiment(ax2, data; channels = 2)
 display(f)
 
 #%% Important to know which protocol is being run
-data.HeaderDict["ProtocolPath"]
-data.HeaderDict["nOperationMode"]
-data.HeaderDict["dacNames"]
-data.HeaderDict["dacUnits"]
-GLMakie.save("IV_curve2_00.png", f)
-
-#%%
-using PyPlot
-#%% We can  use maybe a gaussian curve to properly plot the points maximum value
-xs = collect(1:6)
-yvals = rand(100, maximum(xs))
-
-#%%
-fig, ax = plt.subplots(3, 2)
-for i in xs
-     ys = yvals[:, i]
-     default_violin(ax[i], i, ys)
-end
-
-add_border(ax[1], xpad_ratio = 0.1, ypad_ratio = 0.1)
-#%%
-#%% Make and plot ERG episodic data
-data = readABF(raw"C:\Users\mtarc\OneDrive - The University of Akron\Data\ERG\P14_Wildtype\2019_11_10_P14WT\Mouse2_P14_WT\BaCl_LAP4\Rods" |> parseABF)# |> data_filter
-data_filter!(data)
-
-#%% Generate a makie plot
-dpi = 600
-f = Figure(size = (2.5, 2.5))
-ax1 = Axis(f[1,1], 
-     title = "Experiment Plot Test",
-     xlabel = "Time (ms)", 
-     ylabel = "Response (μV)"
-)
-ax2 = Axis(f[2,1], 
-     title = "Experiment Plot Test",
-     xlabel = "Time (ms)", 
-     ylabel = "Response (μV)"
-)
-
-line_arr = plot_experiment(ax1, data; color = :black)
-line_arr = plot_experiment(ax2, data; color = :black)
-
-line_arr[2].color = :blue
-line_arr[3].color = :green
-
-display(f)
-
-#%%
-fig = plot_experiment(data; color = :black)
-
-f
+GLMakie.save("IV_curve2_00.png", f)