deal with no resistance gene found

metagenlab · Nov 7, 2024 · 1d39c64 · 1d39c64
1 parent c9d0ba8
commit 1d39c64
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/rules/report_generation/report_resistance.rules b/rules/report_generation/report_resistance.rules
@@ -63,5 +63,5 @@ rule resistance_detailed_table:
     shell: 
         """
         head -n1 {input[0]} >> {output}
-        cat {input} | grep -v ORF_ID >> {output}
+        cat {input} | grep -v ORF_ID >> {output} || true
         """