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Add logging features to nuopc/cmeps cap; deprecates zsalinity in cap (C…
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…ICE-Consortium#856)

* merge latest master (#4)

* Isotopes for CICE (CICE-Consortium#423)

Co-authored-by: apcraig <anthony.p.craig@gmail.com>
Co-authored-by: David Bailey <dbailey@ucar.edu>
Co-authored-by: Elizabeth Hunke <eclare@lanl.gov>

* updated orbital calculations needed for cesm

* fixed problems in updated orbital calculations needed for cesm

* update CICE6 to support coupling with UFS

* put in changes so that both ufsatm and cesm requirements for potential temperature and density are satisfied

* Convergence on ustar for CICE. (CICE-Consortium#452) (#5)

* Add atmiter_conv to CICE

* Add documentation

* trigger build the docs

Co-authored-by: David A. Bailey <dbailey@ucar.edu>

* update icepack submodule

* Revert "update icepack submodule"

This reverts commit e70d1ab.

* update comp_ice.backend with temporary ice_timers fix

* Fix threading problem in init_bgc

* Fix additional OMP problems

* changes for coldstart running

* Move the forapps directory

* remove cesmcoupled ifdefs

* Fix logging issues for NUOPC

* removal of many cpp-ifdefs

* fix compile errors

* fixes to get cesm working

* fixed white space issue

* Add restart_coszen namelist option

* update icepack submodule

* change Orion to orion in backend

remove duplicate print lines from ice_transport_driver

* add -link_mpi=dbg to debug flags (CICE-Consortium#8)

* cice6 compile (CICE-Consortium#6)

* enable debug build. fix to remove errors

* fix an error in comp_ice.backend.libcice

* change Orion to orion for machine identification

* changes for consistency w/ current emc-cice5 (CICE-Consortium#13)

Update to emc/develop fork to current CICE consortium 

Co-authored-by: David A. Bailey <dbailey@ucar.edu>
Co-authored-by: Tony Craig <apcraig@users.noreply.github.com>
Co-authored-by: Elizabeth Hunke <eclare@lanl.gov>
Co-authored-by: Mariana Vertenstein <mvertens@ucar.edu>
Co-authored-by: apcraig <anthony.p.craig@gmail.com>
Co-authored-by: Philippe Blain <levraiphilippeblain@gmail.com>

* Fixcommit (CICE-Consortium#14)

Align commit history between emc/develop and cice-consortium/master

* Update CICE6 for integration to S2S


* add wcoss_dell_p3 compiler macro

* update to icepack w/ debug fix

* replace SITE with MACHINE_ID

* update compile scripts

* Support TACC stampede (CICE-Consortium#19)

* update icepack

* add ice_dyn_vp module to CICE_InitMod

* update gitmodules, update icepack

* Update CICE to consortium master (CICE-Consortium#23)

updates include:

* deprecate upwind advection (CICE-Consortium#508)
* add implicit VP solver (CICE-Consortium#491)

* update icepack

* switch icepack branches

* update to icepack master but set abort flag in ITD routine
to false

* update icepack

* Update CICE to latest Consortium master (CICE-Consortium#26)


update CICE and Icepack

* changes the criteria for aborting ice for thermo-conservation errors
* updates the time manager
* fixes two bugs in ice_therm_mushy
* updates Icepack to Consortium master w/ flip of abort flag for troublesome IC cases

* add cice changes for zlvs (CICE-Consortium#29)

* update icepack and pointer

* update icepack and revert gitmodules

* Fix history features

- Fix bug in history time axis when sec_init is not zero.
- Fix issue with time_beg and time_end uninitialized values.
- Add support for averaging with histfreq='1' by allowing histfreq_n to be any value
  in that case.  Extend and clean up construct_filename for history files.  More could
  be done, but wanted to preserve backwards compatibility.
- Add new calendar_sec2hms to converts daily seconds to hh:mm:ss.  Update the
  calchk calendar unit tester to check this method
- Remove abort test in bcstchk, this was just causing problems in regression testing
- Remove known problems documentation about problems writing when istep=1.  This issue
  does not exist anymore with the updated time manager.
- Add new tests with hist_avg = false.  Add set_nml.histinst.

* revert set_nml.histall

* fix implementation error

* update model log output in ice_init

* Fix QC issues

- Add netcdf ststus checks and aborts in ice_read_write.F90
- Check for end of file when reading records in ice_read_write.F90 for
  ice_read_nc methods
- Update set_nml.qc to better specify the test, turn off leap years since we're cycling
  2005 data
- Add check in c ice.t-test.py to make sure there is at least 1825 files, 5 years of data
- Add QC run to base_suite.ts to verify qc runs to completion and possibility to use
  those results directly for QC validation
- Clean up error messages and some indentation in ice_read_write.F90

* Update testing

- Add prod suite including 10 year gx1prod and qc test
- Update unit test compare scripts

* update documentation

* reset calchk to 100000 years

* update evp1d test

* update icepack

* update icepack

* add memory profiling (CICE-Consortium#36)


* add profile_memory calls to CICE cap

* update icepack

* fix rhoa when lowest_temp is 0.0

* provide default value for rhoa when imported temp_height_lowest
(Tair) is 0.0
* resolves seg fault when frac_grid=false and do_ca=true

* update icepack submodule

* Update CICE for latest Consortium master (CICE-Consortium#38)


    * Implement advanced snow physics in icepack and CICE
    * Fix time-stamping of CICE history files
    * Fix CICE history file precision

* Use CICE-Consortium/Icepack master (CICE-Consortium#40)

* switch to icepack master at consortium

* recreate cap update branch (CICE-Consortium#42)


* add debug_model feature
* add required variables and calls for tr_snow

* remove 2 extraneous lines

* remove two log print lines that were removed prior to
merge of driver updates to consortium

* duplicate gitmodule style for icepack

* Update CICE to latest Consortium/main (CICE-Consortium#45)

* Update CICE to Consortium/main (CICE-Consortium#48)


Update OpenMP directives as needed including validation via new omp_suite. Fixed OpenMP in dynamics.
Refactored eap puny/pi lookups to improve scalar performance
Update Tsfc implementation to make sure land blocks don't set Tsfc to freezing temp
Update for sea bed stress calculations

* fix comment, fix env for orion and hera

* replace save_init with step_prep in CICE_RunMod

* fixes for cgrid repro

* remove added haloupdates

* baselines pass with these extra halo updates removed

* change F->S for ocean velocities and tilts

* fix debug failure when grid_ice=C

* compiling in debug mode using -init=snan,arrays requires
initialization of variables

* respond to review comments

* remove inserted whitespace for uvelE,N and vvelE,N

* Add wave-cice coupling; update to Consortium main (CICE-Consortium#51)


* add wave-ice fields
* initialize aicen_init, which turns up as NaN in calc of floediam
export
* add call to icepack_init_wave to initialize wavefreq and dwavefreq
* update to latest consortium main (PR 752)

* add initializationsin ice_state

* initialize vsnon/vsnon_init and vicen/vicen_init

* Update CICE (CICE-Consortium#54)


* update to include recent PRs to Consortium/main

* fix for nudiag_set

allow nudiag_set to be available outside of cesm; may prefer
to fix in coupling interface

* Update CICE for latest Consortium/main (CICE-Consortium#56)

* add run time info

* change real(8) to real(dbl)kind)

* fix syntax

* fix write unit

* use cice_wrapper for ufs timer functionality

* add elapsed model time for logtime

* tidy up the wrapper

* fix case for 'time since' at the first advance

* add timer and forecast log

* write timer values to timer log, not nu_diag
* write log.ice.fXXX

* only one time is needed

* modify message written for log.ice.fXXX

* change info in fXXX log file

* Update CICE from Consortium/main (CICE-Consortium#62)


* Fix CESMCOUPLED compile issue in icepack. (CICE-Consortium#823)
* Update global reduction implementation to improve performance, fix VP bug (CICE-Consortium#824)
* Update VP global sum to exclude local implementation with tripole grids
* Add functionality to change hist_avg for each stream (CICE-Consortium#827)
* Update Icepack to #6703bc533c968 May 22, 2023 (CICE-Consortium#829)
* Fix for mesh check in CESM driver (CICE-Consortium#830)
* Namelist option for time axis position. (CICE-Consortium#839)

* reset timer after Advance to retrieve "wait time"

* add logical control for enabling runtime info

* remove zsal items from cap

* fix typo

---------

Co-authored-by: apcraig <anthony.p.craig@gmail.com>
Co-authored-by: David Bailey <dbailey@ucar.edu>
Co-authored-by: Elizabeth Hunke <eclare@lanl.gov>
Co-authored-by: Mariana Vertenstein <mvertens@ucar.edu>
Co-authored-by: Minsuk Ji <57227195+MinsukJi-NOAA@users.noreply.github.com>
Co-authored-by: Tony Craig <apcraig@users.noreply.github.com>
Co-authored-by: Philippe Blain <levraiphilippeblain@gmail.com>
Co-authored-by: Jun.Wang <Jun.Wang@noaa.gov>
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Showing 4 changed files with 127 additions and 34 deletions.
11 changes: 4 additions & 7 deletions cicecore/drivers/nuopc/cmeps/CICE_InitMod.F90
Original file line number Diff line number Diff line change
Expand Up @@ -232,7 +232,7 @@ subroutine init_restart()
restart_iso, read_restart_iso, &
restart_aero, read_restart_aero, &
restart_hbrine, read_restart_hbrine, &
restart_zsal, restart_bgc
restart_bgc
use ice_restart_driver, only: restartfile
use ice_restart_shared, only: runtype, restart
use ice_state ! almost everything
Expand All @@ -243,7 +243,7 @@ subroutine init_restart()
logical(kind=log_kind) :: &
tr_iage, tr_FY, tr_lvl, tr_pond_lvl, &
tr_pond_topo, tr_fsd, tr_iso, tr_aero, tr_brine, tr_snow, &
skl_bgc, z_tracers, solve_zsal
skl_bgc, z_tracers
integer(kind=int_kind) :: &
ntrcr
integer(kind=int_kind) :: &
Expand All @@ -259,8 +259,7 @@ subroutine init_restart()
if (icepack_warnings_aborted()) call abort_ice(error_message=subname, &
file=__FILE__, line=__LINE__)

call icepack_query_parameters(skl_bgc_out=skl_bgc, &
z_tracers_out=z_tracers, solve_zsal_out=solve_zsal)
call icepack_query_parameters(skl_bgc_out=skl_bgc, z_tracers_out=z_tracers)
call icepack_query_tracer_flags(tr_iage_out=tr_iage, tr_FY_out=tr_FY, &
tr_lvl_out=tr_lvl, tr_pond_lvl_out=tr_pond_lvl, &
tr_pond_topo_out=tr_pond_topo, tr_aero_out=tr_aero, tr_brine_out=tr_brine, &
Expand Down Expand Up @@ -404,8 +403,6 @@ subroutine init_restart()
if (trim(runtype) == 'continue') then
if (tr_brine) &
restart_hbrine = .true.
if (solve_zsal) &
restart_zsal = .true.
if (skl_bgc .or. z_tracers) &
restart_bgc = .true.
endif
Expand All @@ -415,7 +412,7 @@ subroutine init_restart()
if (tr_brine .and. restart_hbrine) call read_restart_hbrine
endif

if (solve_zsal .or. skl_bgc .or. z_tracers) then ! biogeochemistry
if (skl_bgc .or. z_tracers) then ! biogeochemistry
if (tr_fsd) then
write (nu_diag,*) 'FSD implementation incomplete for use with BGC'
call icepack_warnings_flush(nu_diag)
Expand Down
39 changes: 23 additions & 16 deletions cicecore/drivers/nuopc/cmeps/CICE_RunMod.F90
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@ module CICE_RunMod

use ice_kinds_mod
use cice_wrapper_mod, only : t_startf, t_stopf, t_barrierf
use cice_wrapper_mod, only : ufs_logfhour
use ice_fileunits, only: nu_diag
use ice_arrays_column, only: oceanmixed_ice
use ice_constants, only: c0, c1
Expand Down Expand Up @@ -107,11 +108,13 @@ end subroutine CICE_Run

subroutine ice_step

use ice_constants, only: c3600
use ice_boundary, only: ice_HaloUpdate
use ice_calendar, only: dt, dt_dyn, ndtd, diagfreq, write_restart, istep
use ice_calendar, only: idate, msec
use ice_calendar, only: idate, myear, mmonth, mday, msec, timesecs
use ice_calendar, only: calendar_sec2hms, write_history, nstreams, histfreq
use ice_diagnostics, only: init_mass_diags, runtime_diags, debug_model, debug_ice
use ice_diagnostics_bgc, only: hbrine_diags, zsal_diags, bgc_diags
use ice_diagnostics_bgc, only: hbrine_diags, bgc_diags
use ice_domain, only: halo_info, nblocks
use ice_dyn_eap, only: write_restart_eap
use ice_dyn_shared, only: kdyn, kridge
Expand All @@ -133,7 +136,7 @@ subroutine ice_step
use ice_timers, only: ice_timer_start, ice_timer_stop, &
timer_diags, timer_column, timer_thermo, timer_bound, &
timer_hist, timer_readwrite
use ice_communicate, only: MPI_COMM_ICE
use ice_communicate, only: MPI_COMM_ICE, my_task, master_task
use ice_prescribed_mod

integer (kind=int_kind) :: &
Expand All @@ -147,11 +150,13 @@ subroutine ice_step
logical (kind=log_kind) :: &
tr_iage, tr_FY, tr_lvl, tr_fsd, tr_snow, &
tr_pond_lvl, tr_pond_topo, tr_brine, tr_iso, tr_aero, &
calc_Tsfc, skl_bgc, solve_zsal, z_tracers, wave_spec
calc_Tsfc, skl_bgc, z_tracers, wave_spec

character(len=*), parameter :: subname = '(ice_step)'

character (len=char_len) :: plabeld
integer (kind=int_kind) :: hh,mm,ss,ns
character (len=char_len) :: logmsg

if (debug_model) then
plabeld = 'beginning time step'
Expand All @@ -161,8 +166,7 @@ subroutine ice_step
endif

call icepack_query_parameters(calc_Tsfc_out=calc_Tsfc, skl_bgc_out=skl_bgc, &
solve_zsal_out=solve_zsal, z_tracers_out=z_tracers, ktherm_out=ktherm, &
wave_spec_out=wave_spec)
z_tracers_out=z_tracers, ktherm_out=ktherm, wave_spec_out=wave_spec)
call icepack_query_tracer_flags(tr_iage_out=tr_iage, tr_FY_out=tr_FY, &
tr_lvl_out=tr_lvl, tr_pond_lvl_out=tr_pond_lvl, &
tr_pond_topo_out=tr_pond_topo, tr_brine_out=tr_brine, tr_aero_out=tr_aero, &
Expand Down Expand Up @@ -354,7 +358,6 @@ subroutine ice_step
call ice_timer_start(timer_diags) ! diagnostics
if (mod(istep,diagfreq) == 0) then
call runtime_diags(dt) ! log file
if (solve_zsal) call zsal_diags
if (skl_bgc .or. z_tracers) call bgc_diags
if (tr_brine) call hbrine_diags
endif
Expand All @@ -376,15 +379,23 @@ subroutine ice_step
if (tr_fsd) call write_restart_fsd
if (tr_iso) call write_restart_iso
if (tr_aero) call write_restart_aero
if (solve_zsal .or. skl_bgc .or. z_tracers) &
if (skl_bgc .or. z_tracers) &
call write_restart_bgc
if (tr_brine) call write_restart_hbrine
if (kdyn == 2) call write_restart_eap
call final_restart
endif

call ice_timer_stop(timer_readwrite) ! reading/writing

if (my_task == master_task) then
do ns = 1,nstreams
if (write_history(ns) .and. histfreq(ns) .eq. 'h') then
call calendar_sec2hms(msec,hh,mm,ss)
write(logmsg,'(6(i4,2x))')myear,mmonth,mday,hh,mm,ss
call ufs_logfhour(trim(logmsg),timesecs/c3600)
end if
end do
end if
end subroutine ice_step

!=======================================================================
Expand All @@ -396,7 +407,7 @@ end subroutine ice_step
subroutine coupling_prep (iblk)

use ice_arrays_column, only: alvdfn, alidfn, alvdrn, alidrn, &
albicen, albsnon, albpndn, apeffn, fzsal_g, fzsal, snowfracn
albicen, albsnon, albpndn, apeffn, snowfracn
use ice_blocks, only: nx_block, ny_block, get_block, block
use ice_domain, only: blocks_ice
use ice_calendar, only: dt, nstreams
Expand All @@ -411,9 +422,8 @@ subroutine coupling_prep (iblk)
fsens, flat, fswabs, flwout, evap, Tref, Qref, &
scale_fluxes, frzmlt_init, frzmlt, Uref, wind
use ice_flux_bgc, only: faero_ocn, fiso_ocn, Qref_iso, fiso_evap, &
fzsal_ai, fzsal_g_ai, flux_bio, flux_bio_ai, &
fnit, fsil, famm, fdmsp, fdms, fhum, fdust, falgalN, &
fdoc, fdic, fdon, ffep, ffed, bgcflux_ice_to_ocn
flux_bio, flux_bio_ai, fnit, fsil, famm, fdmsp, fdms, fhum, &
fdust, falgalN, fdoc, fdic, fdon, ffep, ffed, bgcflux_ice_to_ocn
use ice_grid, only: tmask
use ice_state, only: aicen, aice
use ice_state, only: aice_init
Expand Down Expand Up @@ -566,8 +576,6 @@ subroutine coupling_prep (iblk)
fsalt_ai (i,j,iblk) = fsalt (i,j,iblk)
fhocn_ai (i,j,iblk) = fhocn (i,j,iblk)
fswthru_ai(i,j,iblk) = fswthru(i,j,iblk)
fzsal_ai (i,j,iblk) = fzsal (i,j,iblk)
fzsal_g_ai(i,j,iblk) = fzsal_g(i,j,iblk)

if (nbtrcr > 0) then
do k = 1, nbtrcr
Expand Down Expand Up @@ -613,7 +621,6 @@ subroutine coupling_prep (iblk)
faero_ocn(:,:,:,iblk), &
alvdr (:,:,iblk), alidr (:,:,iblk), &
alvdf (:,:,iblk), alidf (:,:,iblk), &
fzsal (:,:,iblk), fzsal_g (:,:,iblk), &
flux_bio (:,:,1:nbtrcr,iblk), &
Qref_iso =Qref_iso (:,:,:,iblk), &
fiso_evap=fiso_evap(:,:,:,iblk), &
Expand Down
84 changes: 76 additions & 8 deletions cicecore/drivers/nuopc/cmeps/cice_wrapper_mod.F90
Original file line number Diff line number Diff line change
@@ -1,25 +1,93 @@
module cice_wrapper_mod

#ifdef CESMCOUPLED
use perf_mod , only : t_startf, t_stopf, t_barrierf
use shr_file_mod , only : shr_file_getlogunit, shr_file_setlogunit
use perf_mod , only : t_startf, t_stopf, t_barrierf
use shr_file_mod , only : shr_file_getlogunit, shr_file_setlogunit

use ice_kinds_mod , only : dbl_kind, int_kind, char_len, char_len_long

implicit none

real(dbl_kind) :: wtime = 0.0
contains
! Define stub routines that do nothing - they are just here to avoid
! having cppdefs in the main program
subroutine ufs_settimer(timevalue)
real(dbl_kind), intent(inout) :: timevalue
end subroutine ufs_settimer
subroutine ufs_logtimer(nunit,elapsedsecs,string,runtimelog,time0)
integer, intent(in) :: nunit
integer(int_kind), intent(in) :: elapsedsecs
character(len=*), intent(in) :: string
logical, intent(in) :: runtimelog
real(dbl_kind), intent(in) :: time0
end subroutine ufs_logtimer
subroutine ufs_file_setLogUnit(filename,nunit,runtimelog)
character(len=*), intent(in) :: filename
logical, intent(in) :: runtimelog
integer, intent(out) :: nunit
end subroutine ufs_file_setLogUnit
subroutine ufs_logfhour(msg,hour)
character(len=*), intent(in) :: msg
real(dbl_kind), intent(in) :: hour
end subroutine ufs_logfhour
#else

use ice_kinds_mod , only : dbl_kind, int_kind, char_len, char_len_long

implicit none

real(dbl_kind) :: wtime = 0.0
contains
subroutine ufs_settimer(timevalue)
real(dbl_kind), intent(inout) :: timevalue
real(dbl_kind) :: MPI_Wtime
timevalue = MPI_Wtime()
end subroutine ufs_settimer

subroutine ufs_logtimer(nunit,elapsedsecs,string,runtimelog,time0)
integer, intent(in) :: nunit
integer(int_kind), intent(in) :: elapsedsecs
character(len=*), intent(in) :: string
logical, intent(in) :: runtimelog
real(dbl_kind), intent(in) :: time0
real(dbl_kind) :: MPI_Wtime, timevalue
if (.not. runtimelog) return
if (time0 > 0.) then
timevalue = MPI_Wtime()-time0
write(nunit,*)elapsedsecs,' CICE '//trim(string),timevalue
end if
end subroutine ufs_logtimer

! These are just stub routines put in place to remove
subroutine ufs_file_setLogUnit(filename,nunit,runtimelog)
character(len=*), intent(in) :: filename
logical, intent(in) :: runtimelog
integer, intent(out) :: nunit
if (.not. runtimelog) return
open (newunit=nunit, file=trim(filename))
end subroutine ufs_file_setLogUnit

subroutine ufs_logfhour(msg,hour)
character(len=*), intent(in) :: msg
real(dbl_kind), intent(in) :: hour
character(len=char_len) :: filename
integer(int_kind) :: nunit
write(filename,'(a,i3.3)')'log.ice.f',int(hour)
open(newunit=nunit,file=trim(filename))
write(nunit,'(a)')'completed: cice'
write(nunit,'(a,f10.3)')'forecast hour:',hour
write(nunit,'(a)')'valid time: '//trim(msg)
close(nunit)
end subroutine ufs_logfhour

! Define stub routines that do nothing - they are just here to avoid
! having cppdefs in the main program
subroutine shr_file_setLogUnit(nunit)
integer, intent(in) :: nunit
! do nothing for this stub - its just here to replace
! having cppdefs in the main program
end subroutine shr_file_setLogUnit
subroutine shr_file_getLogUnit(nunit)
integer, intent(in) :: nunit
! do nothing for this stub - its just here to replace
! having cppdefs in the main program
end subroutine shr_file_getLogUnit

subroutine t_startf(string)
character(len=*) :: string
end subroutine t_startf
Expand Down
27 changes: 24 additions & 3 deletions cicecore/drivers/nuopc/cmeps/ice_comp_nuopc.F90
Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,7 @@ module ice_comp_nuopc
use icepack_intfc , only : icepack_query_tracer_flags, icepack_query_parameters
use cice_wrapper_mod , only : t_startf, t_stopf, t_barrierf
use cice_wrapper_mod , only : shr_file_getlogunit, shr_file_setlogunit
use cice_wrapper_mod , only : ufs_settimer, ufs_logtimer, ufs_file_setlogunit, wtime
#ifdef CESMCOUPLED
use shr_const_mod
use shr_orb_mod , only : shr_orb_decl, shr_orb_params, SHR_ORB_UNDEF_REAL, SHR_ORB_UNDEF_INT
Expand Down Expand Up @@ -87,11 +88,12 @@ module ice_comp_nuopc

type(ESMF_Mesh) :: ice_mesh

integer :: nthrds ! Number of threads to use in this component

integer :: nthrds ! Number of threads to use in this component
integer :: nu_timer = 6 ! Simple timer log, unused except by UFS
integer :: dbug = 0
logical :: profile_memory = .false.
logical :: mastertask
logical :: runtimelog = .false.
integer :: start_ymd ! Start date (YYYYMMDD)
integer :: start_tod ! start time of day (s)
integer :: curr_ymd ! Current date (YYYYMMDD)
Expand Down Expand Up @@ -245,6 +247,8 @@ subroutine InitializeAdvertise(gcomp, importState, exportState, clock, rc)
character(len=*), parameter :: subname=trim(modName)//':(InitializeAdvertise) '
!--------------------------------

call ufs_settimer(wtime)

call NUOPC_CompAttributeGet(gcomp, name="ScalarFieldName", value=cvalue, isPresent=isPresent, isSet=isSet, rc=rc)
if (ChkErr(rc,__LINE__,u_FILE_u)) return
if (isPresent .and. isSet) then
Expand Down Expand Up @@ -305,6 +309,12 @@ subroutine InitializeAdvertise(gcomp, importState, exportState, clock, rc)
write(logmsg,'(i6)') dbug
call ESMF_LogWrite('CICE_cap: dbug = '//trim(logmsg), ESMF_LOGMSG_INFO)

call NUOPC_CompAttributeGet(gcomp, name="RunTimeLog", value=cvalue, isPresent=isPresent, isSet=isSet, rc=rc)
if (ChkErr(rc,__LINE__,u_FILE_u)) return
if (isPresent .and. isSet) runtimelog=(trim(cvalue)=="true")
write(logmsg,*) runtimelog
call ESMF_LogWrite('CICE_cap:RunTimeLog = '//trim(logmsg), ESMF_LOGMSG_INFO)

!----------------------------------------------------------------------------
! generate local mpi comm
!----------------------------------------------------------------------------
Expand Down Expand Up @@ -487,6 +497,7 @@ subroutine InitializeAdvertise(gcomp, importState, exportState, clock, rc)
! Set the nu_diag_set flag so it's not reset later

call shr_file_setLogUnit (shrlogunit)
call ufs_file_setLogUnit('./log.ice.timer',nu_timer,runtimelog)

call NUOPC_CompAttributeGet(gcomp, name="diro", value=cvalue, &
isPresent=isPresent, isSet=isSet, rc=rc)
Expand Down Expand Up @@ -699,7 +710,7 @@ subroutine InitializeAdvertise(gcomp, importState, exportState, clock, rc)
end if

call t_stopf ('cice_init_total')

if (mastertask) call ufs_logtimer(nu_timer,msec,'InitializeAdvertise time: ',runtimelog,wtime)
end subroutine InitializeAdvertise

!===============================================================================
Expand Down Expand Up @@ -735,6 +746,7 @@ subroutine InitializeRealize(gcomp, importState, exportState, clock, rc)
rc = ESMF_SUCCESS
if (dbug > 5) call ESMF_LogWrite(subname//' called', ESMF_LOGMSG_INFO)

call ufs_settimer(wtime)
!----------------------------------------------------------------------------
! Second cice initialization phase -after initializing grid info
!----------------------------------------------------------------------------
Expand Down Expand Up @@ -912,6 +924,7 @@ subroutine InitializeRealize(gcomp, importState, exportState, clock, rc)

call flush_fileunit(nu_diag)

if (mastertask) call ufs_logtimer(nu_timer,msec,'InitializeRealize time: ',runtimelog,wtime)
end subroutine InitializeRealize

!===============================================================================
Expand Down Expand Up @@ -957,6 +970,8 @@ subroutine ModelAdvance(gcomp, rc)
!--------------------------------

rc = ESMF_SUCCESS
if (mastertask) call ufs_logtimer(nu_timer,msec,'ModelAdvance time since last step: ',runtimelog,wtime)
call ufs_settimer(wtime)

call ESMF_LogWrite(subname//' called', ESMF_LOGMSG_INFO)

Expand Down Expand Up @@ -1177,6 +1192,9 @@ subroutine ModelAdvance(gcomp, rc)

if (dbug > 5) call ESMF_LogWrite(subname//' done', ESMF_LOGMSG_INFO)

if (mastertask) call ufs_logtimer(nu_timer,msec,'ModelAdvance time: ',runtimelog,wtime)
call ufs_settimer(wtime)

end subroutine ModelAdvance

!===============================================================================
Expand Down Expand Up @@ -1321,6 +1339,7 @@ subroutine ModelFinalize(gcomp, rc)
!--------------------------------

rc = ESMF_SUCCESS
call ufs_settimer(wtime)
if (dbug > 5) call ESMF_LogWrite(subname//' called', ESMF_LOGMSG_INFO)
if (my_task == master_task) then
write(nu_diag,F91)
Expand All @@ -1329,6 +1348,8 @@ subroutine ModelFinalize(gcomp, rc)
end if
if (dbug > 5) call ESMF_LogWrite(subname//' done', ESMF_LOGMSG_INFO)

if(mastertask) call ufs_logtimer(nu_timer,msec,'ModelFinalize time: ',runtimelog,wtime)

end subroutine ModelFinalize

!===============================================================================
Expand Down

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