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GridGeoSampler: don't change stride of last patch #1329

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merged 2 commits into from
May 14, 2023
Merged

GridGeoSampler: don't change stride of last patch #1329

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d30cb49
GridGeoSampler: don't change stride of last patch
adamjstewart May 12, 2023
7d9a17d
Sample outside bounds of file
adamjstewart May 13, 2023
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27 changes: 23 additions & 4 deletions tests/samplers/test_single.py
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Original file line number Diff line number Diff line change
Expand Up @@ -162,7 +162,16 @@ def dataset(self) -> CustomGeoDataset:
@pytest.fixture(
scope="function",
params=product(
[(8, 1), (6, 2), (4, 3), (2.5, 3), ((8, 6), (1, 2)), ((6, 4), (2, 3))],
[
(8, 1),
(6, 2),
(4, 3),
(4, 4),
(2, 4),
(2.5, 3),
((8, 6), (1, 2)),
((6, 4), (2, 3)),
],
[Units.PIXELS, Units.CRS],
),
)
Expand All @@ -172,8 +181,18 @@ def sampler(self, dataset: CustomGeoDataset, request: SubRequest) -> GridGeoSamp

def test_iter(self, sampler: GridGeoSampler) -> None:
for query in sampler:
assert sampler.roi.minx <= query.minx <= query.maxx <= sampler.roi.maxx
assert sampler.roi.miny <= query.miny <= query.miny <= sampler.roi.maxy
assert (
sampler.roi.minx
<= query.minx
<= query.maxx
< sampler.roi.maxx + sampler.stride[1]
)
assert (
sampler.roi.miny
<= query.miny
<= query.miny
< sampler.roi.maxy + sampler.stride[0]
)
assert sampler.roi.mint <= query.mint <= query.maxt <= sampler.roi.maxt

assert math.isclose(query.maxx - query.minx, sampler.size[1])
Expand Down Expand Up @@ -222,7 +241,7 @@ def test_float_multiple(self) -> None:
iterator = iter(sampler)
assert len(sampler) == 2
assert next(iterator) == BoundingBox(0, 5, 0, 5, 0, 10)
assert next(iterator) == BoundingBox(1, 6, 0, 5, 0, 10)
assert next(iterator) == BoundingBox(5, 10, 0, 5, 0, 10)

@pytest.mark.slow
@pytest.mark.parametrize("num_workers", [0, 1, 2])
Expand Down
1 change: 1 addition & 0 deletions torchgeo/datasets/geo.py
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Expand Up @@ -487,6 +487,7 @@ def _merge_files(
indexes=band_indexes,
out_shape=out_shape,
window=from_bounds(*bounds, src.transform),
boundless=True,
)
else:
dest, _ = rasterio.merge.merge(
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merge has no boundless parameter, but doesn't need one. I confirmed that it properly samples outside the bounds of the file and uses nodata pixels for padding.

Expand Down
9 changes: 0 additions & 9 deletions torchgeo/samplers/single.py
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Expand Up @@ -169,9 +169,6 @@ class GridGeoSampler(GeoSampler):
The overlap between each chip (``chip_size - stride``) should be approximately equal
to the `receptive field <https://distill.pub/2019/computing-receptive-fields/>`_ of
the CNN.

Note that the stride of the final set of chips in each row/column may be adjusted so
that the entire :term:`tile` is sampled without exceeding the bounds of the dataset.
"""

def __init__(
Expand Down Expand Up @@ -242,17 +239,11 @@ def __iter__(self) -> Iterator[BoundingBox]:
for i in range(rows):
miny = bounds.miny + i * self.stride[0]
maxy = miny + self.size[0]
if maxy > bounds.maxy:
maxy = bounds.maxy
miny = bounds.maxy - self.size[0]

# For each column...
for j in range(cols):
minx = bounds.minx + j * self.stride[1]
maxx = minx + self.size[1]
if maxx > bounds.maxx:
maxx = bounds.maxx
minx = bounds.maxx - self.size[1]

yield BoundingBox(minx, maxx, miny, maxy, mint, maxt)

Expand Down