added bamrcpath option for pbamrc #54

	name: Python Package using Conda

	on: [push]

	jobs:
	build-linux-py38:
	runs-on: ubuntu-latest
	strategy:
	max-parallel: 5
	matrix:
	python-version: [ "3.8" ]

	steps:
	- uses: actions/checkout@v3
	- uses: conda-incubator/setup-miniconda@v2
	with:
	activate-environment: test
	python-version: ${{ matrix.python-version }}
	auto-activate-base: false
	- name: Add conda to system path
	shell: bash -el {0}
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	# export $CONDA/bin >> $GITHUB_PATH
	which python
	python --version
	which python
	$CONDA/bin/python --version
	conda env update --file environment.yml --name base
	conda install flake8
	# stop the build if there are Python syntax errors or undefined names
	# flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	conda install pytest
	python setup.py install
	pytest

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