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test(multiple): fix failing tests #2338

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Oct 17, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/commit.yml
Original file line number Diff line number Diff line change
Expand Up @@ -137,7 +137,7 @@ jobs:
defaults:
run:
shell: bash -l {0}
timeout-minutes: 45
timeout-minutes: 60
steps:

- name: Checkout repo
Expand Down
22 changes: 14 additions & 8 deletions autotest/test_generate_classes.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
import sys
from os import environ
from pathlib import Path
from platform import system
from pprint import pprint
from typing import Iterable
from warnings import warn
Expand Down Expand Up @@ -30,7 +31,6 @@ def pytest_generate_tests(metafunc):
against all of the versions of mf6io flopy guarantees
support for- maybe develop and latest release? Though
some backwards compatibility seems ideal if possible.
This would need changes in GH Actions CI test matrix.
"""

owner = "MODFLOW-USGS"
Expand Down Expand Up @@ -86,8 +86,10 @@ def test_generate_classes_from_github_refs(

# create virtual environment
venv = function_tmpdir / "venv"
python = venv / "bin" / "python"
pip = venv / "bin" / "pip"
win = system() == "Windows"
bin = "Scripts" if win else "bin"
python = venv / bin / ("python" + (".exe" if win else ""))
pip = venv / bin / ("pip" + (".exe" if win else ""))
cli_run([str(venv)])
print(f"Using temp venv at {venv} to test class generation from {ref}")

Expand All @@ -99,11 +101,15 @@ def test_generate_classes_from_github_refs(

# get creation time of files
flopy_path = (
venv
/ "lib"
/ f"python{sys.version_info.major}.{sys.version_info.minor}"
/ "site-packages"
/ "flopy"
(venv / "Lib" / "site-packages" / "flopy")
if win
else (
venv
/ "lib"
/ f"python{sys.version_info.major}.{sys.version_info.minor}"
/ "site-packages"
/ "flopy"
)
)
assert flopy_path.is_dir()
mod_files = list((flopy_path / "mf6" / "modflow").rglob("*")) + list(
Expand Down
5 changes: 4 additions & 1 deletion autotest/test_mp7.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
import os
from pathlib import Path
from platform import system

import matplotlib.pyplot as plt
import numpy as np
Expand Down Expand Up @@ -774,7 +775,8 @@ def test_mp7_output(function_tmpdir, case, array_snapshot):
assert len(pathlines) == 23
pathlines = pd.DataFrame(np.concatenate(pathlines))
assert pathlines.particleid.nunique() == 23
assert array_snapshot == pathlines.round(3).to_records(index=False)
if system() != "Darwin":
assert array_snapshot == pathlines.round(3).to_records(index=False)

# check endpoint output files
endpoint_file = Path(model.model_ws) / f"ex01_{case}_mp.mpend"
Expand All @@ -793,6 +795,7 @@ def test_mp7_output(function_tmpdir, case, array_snapshot):
raise AssertionError(
"plot_pathline not properly splitting particles from recarray"
)
# plt.show()
plt.close()


Expand Down
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