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| name: fuzzy | ||
| on: pull_request | ||
| jobs: | ||
| test-fuzzydata: | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| strategy: | ||
| matrix: | ||
| python-version: ["3.8"] | ||
| engine: ["ray", "dask"] | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| with: | ||
| fetch-depth: 1 | ||
| - uses: conda-incubator/setup-miniconda@v2 | ||
| with: | ||
| activate-environment: modin | ||
| environment-file: environment-dev.yml | ||
| python-version: 3.8 | ||
| channel-priority: strict | ||
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | ||
| - name: Conda environment | ||
| run: | | ||
| conda info | ||
| conda list | ||
| - name: test-fuzzydata (engine ${{matrix.engine}}, python ${{matrix.python-version}}) | ||
| run: python -m pytest modin/experimental/fuzzydata/test/test_fuzzydata.py -Wignore::UserWarning | ||
| env: | ||
| MODIN_ENGINE: ${{matrix.engine}} | ||
| - uses: actions/upload-artifact@v3 | ||
| with: | ||
| name: fuzzydata-test-workflow-${{matrix.engine}} | ||
| path: /tmp/fuzzydata-test-wf-${{matrix.engine}}/* # Must match output dir in test_fuzzydata.py | ||
| if-no-files-found: error |
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| Original file line number | Diff line number | Diff line change |
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| # Licensed to Modin Development Team under one or more contributor license agreements. | ||
| # See the NOTICE file distributed with this work for additional information regarding | ||
| # copyright ownership. The Modin Development Team licenses this file to you under the | ||
| # Apache License, Version 2.0 (the "License"); you may not use this file except in | ||
| # compliance with the License. You may obtain a copy of the License at | ||
| # | ||
| # http://www.apache.org/licenses/LICENSE-2.0 | ||
| # | ||
| # Unless required by applicable law or agreed to in writing, software distributed under | ||
| # the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF | ||
| # ANY KIND, either express or implied. See the License for the specific language | ||
| # governing permissions and limitations under the License. | ||
|
|
||
| """Module holds experimental fuzzydata specific functionality for Modin.""" |
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| # Licensed to Modin Development Team under one or more contributor license agreements. | ||
| # See the NOTICE file distributed with this work for additional information regarding | ||
| # copyright ownership. The Modin Development Team licenses this file to you under the | ||
| # Apache License, Version 2.0 (the "License"); you may not use this file except in | ||
| # compliance with the License. You may obtain a copy of the License at | ||
| # | ||
| # http://www.apache.org/licenses/LICENSE-2.0 | ||
| # | ||
| # Unless required by applicable law or agreed to in writing, software distributed under | ||
| # the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF | ||
| # ANY KIND, either express or implied. See the License for the specific language | ||
| # governing permissions and limitations under the License. |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,65 @@ | ||
| # Licensed to Modin Development Team under one or more contributor license agreements. | ||
| # See the NOTICE file distributed with this work for additional information regarding | ||
| # copyright ownership. The Modin Development Team licenses this file to you under the | ||
| # Apache License, Version 2.0 (the "License"); you may not use this file except in | ||
| # compliance with the License. You may obtain a copy of the License at | ||
| # | ||
| # http://www.apache.org/licenses/LICENSE-2.0 | ||
| # | ||
| # Unless required by applicable law or agreed to in writing, software distributed under | ||
| # the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF | ||
| # ANY KIND, either express or implied. See the License for the specific language | ||
| # governing permissions and limitations under the License. | ||
|
|
||
| import os | ||
| import glob | ||
| import uuid | ||
| import shutil | ||
| from fuzzydata.core.generator import generate_workflow | ||
| from fuzzydata.clients.modin import ModinWorkflow | ||
|
|
||
| from modin.config import Engine | ||
|
|
||
|
|
||
| def test_fuzzydata_sample_workflow(): | ||
| # Workflow Generation Options | ||
| wf_name = str(uuid.uuid4())[:8] # Unique name for the generated workflow | ||
| num_versions = 10 # Number of unique CSV files to generate | ||
| cols = 33 # Columns in Base Artifact | ||
| rows = 1000 # Rows in Base Artifact | ||
| bfactor = 1.0 # Branching Factor - 0.1 is linear, 10.0 is star-like | ||
| exclude_ops = ["groupby"] # In-Memory groupby operations cause issue #4287 | ||
| matfreq = 2 # How many operations to chain before materialization | ||
|
|
||
| engine = Engine.get().lower() | ||
|
|
||
| # Create Output Directory for Workflow Data | ||
| base_out_directory = ( | ||
| f"/tmp/fuzzydata-test-wf-{engine}/" # Must match corresponding github-action | ||
| ) | ||
| if os.path.exists(base_out_directory): | ||
| shutil.rmtree(base_out_directory) | ||
| output_directory = f"{base_out_directory}/{wf_name}/" | ||
| os.makedirs(output_directory, exist_ok=True) | ||
|
|
||
| # Start Workflow Generation | ||
| workflow = generate_workflow( | ||
| workflow_class=ModinWorkflow, | ||
| name=wf_name, | ||
| num_versions=num_versions, | ||
| base_shape=(cols, rows), | ||
| out_directory=output_directory, | ||
| bfactor=bfactor, | ||
| exclude_ops=exclude_ops, | ||
| matfreq=matfreq, | ||
| wf_options={"modin_engine": engine}, | ||
| ) | ||
|
|
||
| # Assertions that the workflow generation worked correctly | ||
| assert len(workflow) == num_versions | ||
| assert len(list(glob.glob(f"{output_directory}/artifacts/*.csv"))) == len( | ||
| workflow.artifact_dict | ||
| ) | ||
| assert os.path.exists(f"{output_directory}/{workflow.name}_operations.json") | ||
| assert os.path.getsize(f"{output_directory}/{workflow.name}_operations.json") > 0 | ||
| assert os.path.exists(f"{output_directory}/{workflow.name}_gt_graph.csv") |
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