How to use

1. Install miniconda in your $HOME
2. Clone this repository to $HOME/.config/snakemake/muwhpc_slurm
3. Make sure that $SNAKEMAKE_PROFILE is set, by adding export SNAKEMAKE_PROFILE=muwhpc_slurm to ~/.bashrc

You are ready to go! Now a simple call to 'snakemake' will push your stuff to the cluster :)

For more extensive documentation, refer to https://github.com/Snakemake-Profiles/slurm/tree/master and https://github.com/epigen/cemm.slurm.sm (note: not everything applies for the second link)