There are a couple ways in which you can use this library. The first and probably the easiest is by using pip and PyPi:
pip install landscapes
You can also install directly from this git repo:
pip install git+https://github.com/nathanrooy/landscapes
Lastly, you can always clone/download this repo and use as is.
wget https://github.com/nathanrooy/landscapes/archive/master.zip
unzip master.zip
cd landscapes-master
function name | method | dimensions |
---|---|---|
Ackley | ackley() |
2 |
Ackley N.2 | ackley_n2() |
2 |
Adjiman | adjiman() |
2 |
AMGM | amgm() |
n |
Bartels Conn | bartels_conn() |
2 |
Bird | bird() |
2 |
Beale | beale() |
2 |
Bent Cigar | bent_cigar() |
n |
Bohachevsky N.1 | bohachevsky_n1() |
2 |
Bohachevsky N.2 | bohachevsky_n2() |
2 |
Bohachevsky N.3 | bohachevsky_n3() |
2 |
Booth | booth() |
2 |
Branin | branin() |
2 |
Brent | brent() |
2 |
Brown | brown() |
n |
Bukin n6 | bukin_n6() |
2 |
3-Hump Camel | camel_hump_3() |
2 |
6-Hump Camel | camel_hump_6() |
2 |
Carrom Table | carrom_table() |
2 |
Chichinadze | chichinadze() |
2 |
Chung Reynolds | chung_reynolds() |
n |
Colville | colville() |
4 |
Cosine Mixture | cosine_mixture() |
n |
Cross-in-Tray | cross_in_tray() |
2 |
Csendes | csendes() |
n |
Cube | cube() |
2 |
Damavandi | damavandi() |
2 |
Deckkers-Aarts | deckkers_aarts() |
2 |
Dixon & Price | dixon_price() |
n |
Drop Wave | drop_wave() |
2 |
Easom | easom() |
2 |
Eggholder | eggholder() |
2 |
Exponential | exponential() |
n |
Freudenstein Roth | freudenstein_roth() |
2 |
Goldstein–Price | goldstein_price() |
2 |
Griewank | griewank() |
n |
Himmelblau | himmelblau() |
2 |
Hölder table | holder_table() |
2 |
Hosaki | hosaki() |
2 |
Keane | keane() |
2 |
Leon | leon() |
2 |
Lévi function N.13 | levi_n13() |
2 |
Matyas | matyas() |
2 |
Michalewicz | michalewicz |
n |
McCormick | mccormick() |
2 |
Parsopoulos | parsopoulos() |
2 |
Pen Holder | pen_holder() |
2 |
Plateau | plateau() |
n |
Qing | qing() |
n |
Quartic | quartic() |
n |
Rastrigin | rastrigin() |
n |
Rotated Hyper-Ellipsoid | rotated_hyper_ellipsoid() |
n |
Rosenbrock | rosenbrock() |
n |
Salomon | salomon() |
n |
Schaffer N.2 | schaffer_n2() |
2 |
Schaffer N.4 | schaffer_n4() |
2 |
Schwefel | schwefel() |
n |
Sphere | sphere() |
n |
Step | step() |
n |
Styblinski–Tang | styblinski_tang() |
n |
Sum of Different Powers | sum_of_different_powers() |
n |
Sum of Squares | sum_of_squares() |
n |
Trid | trid() |
n |
Tripod | tripod() |
2 |
Wolfe | wolfe() |
3 |
Zakharov | zakharov() |
n |
As a simple example, let's use the Nelder-Mead method via SciPy to minimize the sphere function. We'll start off by importing the sphere
function from Landscapes and the minimize
method from SciPy.
>>> from landscapes.single_objective import sphere
>>> from scipy.optimize import minimize
Next, we'll call the minimize
method using a starting location of [5,5].
>>> minimize(sphere, x0=[5,5], method='Nelder-Mead')
The output of which should look close to this:
final_simplex: (array([[-3.33051318e-05, -1.93825710e-05],
[ 4.24925225e-05, 1.37129516e-05],
[ 3.09383247e-05, -4.04797876e-05]]), array([1.48491586e-09, 1.99365951e-09, 2.59579314e-09]))
fun: 1.4849158640215086e-09
message: 'Optimization terminated successfully.'
nfev: 80
nit: 44
status: 0
success: True
x: array([-3.33051318e-05, -1.93825710e-05])
from landscapes.single_objective import ackley
global minimum | bounds | usage |
---|---|---|
f(x=0,y=0)=0 | -5.12 <= x, y <= 5.12 | ackley([x,y]) |
from landscapes.single_objective import beale
global minimum | bounds | usage |
---|---|---|
f(x=3, y=0.5) = 0 | -4.5 <= x, y <= 4.5 | beale([x,y]) |
from landscapes.single_objective import booth
global minimum | bounds | usage |
---|---|---|
f(x=1, y=3) = 0 | -10 <= x, y <= 10 | booth([x,y]) |
from landscapes.single_objective import bukin_n6
global minimum | bounds | usage |
---|---|---|
f(x=-10, y=1) = 0 | -15 <= x <= -5 -3 <= y <= 3 |
bukin_n6([x,y]) |
from landscapes.single_objective import cross_in_tray
global minimum(s) | bounds | usage |
---|---|---|
f(x=1.34941, y=-1.34941) = -2.06261 f(x=1.34941, y=1.34941) = -2.06261 f(x=-1.34941, y=1.34941) = -2.06261 f(x=-1.34941, y=-1.34941) = -2.06261 |
-10 <= x, y <= 10 | cross_in_tray([x,y]) |
from landscapes.single_objective import easom
global minimum | bounds | usage |
---|---|---|
f(x=pi, y=pi) = -1 | -100 <= x, y <= 100 | easom([x,y]) |
from landscapes.single_objective import eggholder
global minimum | bounds | usage |
---|---|---|
f(x=512, y=404.2319) = -959.6407 | -512 <= x, y <= 512 | eggholder([x,y]) |
from landscapes.single_objective import goldstein_price
global minimum | bounds | usage |
---|---|---|
f(x=0, y=-1) = 3 | -2 <= x, y <= 2 | goldstein_price([x,y]) |
from landscapes.single_objective import himmelblau
global minimum(s) | bounds | usage |
---|---|---|
f(x=3.0, y=2.0) = 0.0 f(x=-2.805118, y=3.131312) = 0.0 f(x=-3.779310, y=-3.283186) = 0.0 f(x=3.584428, y=-1.848126) = 0.0 |
-5 <= x, y <= 5 | himmelblau([x,y]) |
from landscapes.single_objective import holder_table
global minimum(s) | bounds | usage |
---|---|---|
f(x=8.05502, y=9.66459) = -19.2085 f(x=-8.05502, y=9.66459) = -19.2085 f(x=8.05502, y=-9.66459) = -19.2085 f(x=-8.05502, y=-9.66459) = -19.2085 |
-10 <= x, y <= 10 | holder_table([x,y]) |
from landscapes.single_objective import levi_n13
global minimum | bounds | usage |
---|---|---|
f(x=1, y=1) = 0 | -10 <= x, y <= 10 | levi_n13([x,y]) |
from landscapes.single_objective import matyas
global minimum | bounds | usage |
---|---|---|
f(x=0, y=0) = 0 | -10 <= x, y <= 10 | matyas([x,y]) |
from landscapes.single_objective import mccormick
global minimum | bounds | usage |
---|---|---|
f(x=-0.54719, y=-1.54719) = -1.9133 | -1.5 <= x <= 4 -3 <= y <= 4 |
mccormick([x,y]) |
from landscapes.single_objective import rastrigin
global minimum | bounds | usage |
---|---|---|
f([0,...,0]) = 0 | -5.12 <= x_i <= 5.12 | rastrigin([x_1,...,x_n]) |
from landscapes.single_objective import rosenbrock
global minimum | bounds | usage |
---|---|---|
f([1,...,1]) = 0 | -inf <= x_i <= inf | rosenbrock([x_1,...,x_n]) |
from landscapes.single_objective import schaffer_n2
global minimum | bounds | usage |
---|---|---|
f(x=0, y=0) = 0 | -100 <= x, y <= 100 | schaffer_n2([x,y]) |
from landscapes.single_objective import schaffer_n4
global minimum | bounds | usage |
---|---|---|
f(x=0, y=1.25313) = 0.292579 f(x=0, y=-1.25313) = 0.292579 |
-100 <= x, y <= 100 | schaffer_n4([x,y]) |
from landscapes.single_objective import sphere
global minimum | bounds | usage |
---|---|---|
f([0,...,0]) = 0 | -inf <= x_i <= inf | sphere([x_1,...x_n]) |
from landscapes.single_objective import styblinski_tang
global minimum | bounds | usage |
---|---|---|
-39.16617n < f([-2.903534,...,-2.903534]) < -39.16616n | -5 <= x_i <= 5 | styblinski_tang([x_1,...x_n]) |
from landscapes.single_objective import camel_hump_3
global minimum | bounds | usage |
---|---|---|
-f(x=0, y=0) = 0 | -5 <= x_i <= 5 | three_hump_camel([x,y]) |
from landscapes.single_objective import tsp
There are several ways to use the TSP function within Landscapes, all of which involve specifying a list of tsp stops, and a distance function.
Example 1: Multi-dimensional list of points using Euclidean distance function
from landscapes.single_objective import tsp
from scipy.spatial import distance
np.random.seed(10)
pts = np.random.rand(5,3)
which will yield a list of three-dimensional points:
array([[0.77132064, 0.02075195, 0.63364823],
[0.74880388, 0.49850701, 0.22479665],
[0.19806286, 0.76053071, 0.16911084],
[0.08833981, 0.68535982, 0.95339335],
[0.00394827, 0.51219226, 0.81262096]])
Then, initialize the tsp function:
tsp_cost = tsp(distance.euclidean, close_loop=True).dist
To calculate the total travel distance, simply call the function with the list of points:
tsp_cost(pts)
>>> 3.2043803044101096
The flag close_loop
simply specifies whether the distance between the first and last points should be calculated.
Example 2: Specifying points using Latitude and Longitude
Insead of multi-dimensional points in space, let's specify a list of locations based on longitude and latitude then calculate the distances using the inverse Vincenty's formulae which is available in the spatial
package [here].
First let's import our Vincenty based distance function and wrap it for easier use.
from spatial import vincenty_inverse as vi
def vi_tsp(p1, p2):
return vi(p1, p2).mi() # output distance in miles
Next, let's specify some locations. Here are some breweries in Cincinnati. Each row represents a [longitude, latitude]
.
pts = [
[-84.508661, 39.110187],
[-84.520021, 39.117219],
[-84.514938, 39.113937],
[-84.517401, 39.111322],
[-84.476906, 39.128957]]
Again, initialize the tsp function:
tsp_cost = tsp(vi_tsp, close_loop=True).dist
And finally, calculate the travel distance:
tsp_cost(pts)
>>> 5.993331331465468
Example #3: Geospatial distances on a graph
In Example #2
we used Vincenty's inverse formulae which calculates the distance between two longitude and latitude pairs "as the crow flies". That's great for some situations, but in a city where we're limited by streets and sidewalks, it's a little less useful. Instead, what we want is the actual distance if we were going to walk or bike. This is the network distance and is only slighly more complex, but involves some additinal libraries.
First, import the dependencies:
import osmnx as ox
import networkx as nx
import pandas as pd
Next, load the brewery locations (available here) and prepare the Open Street Map (OSM) network graph.
pts_df = pd.read_csv('brewery_locations.csv')
# determine bounds for osm network
lats = locs_df['lat'].values
lngs = locs_df['lng'].values
bbox = [
max(lats) + 0.1,
min(lats) - 0.1,
max(lngs) + 0.1,
min(lngs) - 0.1]
# download osm street network
G = ox.graph_from_bbox(bbox[0], bbox[1], bbox[2], bbox[3], network_type='drive')
Downloading the osm graph might take a bit depending on internet speed. Next, let's create a new cost function that takes in two brewery names and returns the network distance in meters.
def osm_dist(n0, n1):
p0 = pts_df[pts_df['name']==n0][['lat','lng']].values[0]
p1 = pts_df[pts_df['name']==n1][['lat','lng']].values[0]
p0_node = ox.get_nearest_node(G, p0)
p1_node = ox.get_nearest_node(G, p1)
dist_m = nx.shortest_path_length(G, p0_node, p1_node, weight='length')
return dist_m
Again, specify the tsp cost function:
tsp_cost = tsp(osm_dist, close_loop=True).dist
And to get the network distance:
tsp_cost(locs_df['name'].values)
>>> 75950.73399999998
This translates to roughly 47 miles.