apache-mod-passenger and base64 v0.1.1+ gem conflict #293
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…onward (#17) * Bump bootstrap from 4.1.0 to 5.2.3 * Refactor home page cards * Refactor top navigation bar * Fix close buttons on dismissible alerts * Refactor sticky footer code * Repair Admin tabbed interface * Refactor form to fix spacing issues * Remove unused styles * Remove unnecessary nested fluid container * Refactor form to fix spacing issues * Fix alignment issue with annotator plus spinner * Fix broken tabbed navigation for ontology tabs * Remove text decoration in the ontology info bar * Clean up display of ontology information buttons * Restore bold font in ontology metadata cards * Restore bold font for submissions header * Remove anchor text decoration for metadata cards * Restore border at the top of the submissions table * Remove bottom border from show more subs cell * Restore top borders to details and metrics tables * Fix add proposal dropdown button * Fix class permalink dialog * Fix create new mapping dialog * Fix add and remove synonym dialogs * Adjust buttons on create mapping dialog * Refactor create new mapping form * Add back platforms overwritten during merge * Refactor horizontal form to fix spacing issues * Restore padding in class details pane * Refactor class search form to fix spacing issues * Restore appearance of search links * Restore left alignment in ontology column * add download link for OntoPortal Virtual Appliance v3.2.1 * Restore link appearance in ontology column * Refactor form to fix spacing and alignment issues * Fix footer layout and presentation issues * Remove text-decoration for ontology visits Also prevent wrapping of column header text * Fix node obsoletion form * Fix node rename form * jQuery toggle no longer needed * Fix create and remove synonym dialog forms * Fix jump to input group * Remove text decoration for details and mappings * Replace Uglifier with Terser Fixes Uglifier::Error that prevents asset precompilation * Pin graphql gem to less than 2.1 * Pin base64 gem to 0.1.0 See ncbo#293 * Remove text decoration from ontology list * Restore space underneath filter text box * Add download link for Virtual Appliance v3.2.2 * Use regular dropdown instead of split type * Display site notices above loading splash div Prevents a jumpy page appearance when the ontologies loading message is displayed * Update Gemfile.lock * Adjust font size for autocomplete results list Resolves #296 * Fix login requirement for notes email subscriptions The sanitize method was stripping the href attribute. See #298. * Encode user ID portion of subscriptions params Resolves #300 * Fix Uncaught TypeError on notes emails subscribe See #298 * Fix some RuboCop warnings * Refactor subscribed_to_ontology? method Account for the case where the user parameter doesn't have the ontology attribute loaded on the list of associated subscription objects --------- Co-authored-by: Alex Skrenchuk <alexskr@stanford.edu>
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We are getting the following error in staging when faraday gem is updated from 2.7.10 -> 2.7.11 and newrelic 9.5.0 -> 9.6.0
this error pops in staging which runs apache/mod-passenger web sever and is not reproducable when running app with thin server or passenger stand-alone server.
Both faraday 2.7.11 and newrelic 9.6.0 gems add base64 gem dependency which triggers the install of 0.1.1+ base64 gem but passenger seem to pick up base64 library v0.1.0 which is bundled in with ruby 3.0.6.
the solution is to pin base64 to v0.1.0 in the Gemfile
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