Copy example data recursively #266
Workflow file for this run
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| name: CI | |
| on: | |
| - push | |
| - pull_request | |
| - workflow_dispatch | |
| jobs: | |
| test-setup-nextstrain-cli: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: ./actions/setup-nextstrain-cli | |
| - run: nextstrain version --verbose | |
| test-pathogen-repo-ci: | |
| uses: ./.github/workflows/pathogen-repo-ci.yaml | |
| with: | |
| repo: nextstrain/zika | |
| secrets: inherit | |
| test-pathogen-repo-ci-no-example-data: | |
| uses: ./.github/workflows/pathogen-repo-ci.yaml | |
| with: | |
| repo: nextstrain/zika-tutorial | |
| test-pathogen-repo-ci-failure: | |
| uses: ./.github/workflows/pathogen-repo-ci.yaml | |
| with: | |
| repo: nextstrain/zika-tutorial | |
| build-args: __BOGUS_BUILD_TARGET__ | |
| continue-on-error: true | |
| test-docs-ci-conda: | |
| uses: ./.github/workflows/docs-ci.yaml | |
| with: | |
| repo: nextstrain/docs.nextstrain.org | |
| docs-directory: . | |
| environment-file: environment.yml | |
| test-docs-ci-pip: | |
| uses: ./.github/workflows/docs-ci.yaml | |
| with: | |
| repo: nextstrain/augur | |
| docs-directory: docs/ | |
| pip-install-target: .[dev] | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - run: ./devel/check-readme | |
| - uses: ./actions/shellcheck |