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wip! worthless shovelling
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tsibley committed Aug 21, 2023
1 parent cf36c90 commit 910ba61
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Showing 2 changed files with 10 additions and 5 deletions.
12 changes: 8 additions & 4 deletions .github/workflows/pathogen-repo-build.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -347,7 +347,8 @@ jobs:
nextstrain build \
--aws-batch \
--attach "$AWS_BATCH_JOB_ID" \
--no-download
--no-download \
.
# Wait for up to another 6 hours (hours 6–12) if the preceding wait-N job
# timed out. Our heuristic for job timeout is when the job is cancelled but
# the workflow isn't.
Expand Down Expand Up @@ -403,7 +404,8 @@ jobs:
nextstrain build \
--aws-batch \
--attach "$AWS_BATCH_JOB_ID" \
--no-download
--no-download \
.
needs: [wait-1, run-build, workflow-context]
if: needs.wait-1.result == 'cancelled' && !cancelled()
# 12–18 hours
Expand Down Expand Up @@ -459,7 +461,8 @@ jobs:
nextstrain build \
--aws-batch \
--attach "$AWS_BATCH_JOB_ID" \
--no-download
--no-download \
.
needs: [wait-2, run-build, workflow-context]
if: needs.wait-2.result == 'cancelled' && !cancelled()
# 18–24 hours
Expand Down Expand Up @@ -515,6 +518,7 @@ jobs:
nextstrain build \
--aws-batch \
--attach "$AWS_BATCH_JOB_ID" \
--no-download
--no-download \
.
needs: [wait-3, run-build, workflow-context]
if: needs.wait-3.result == 'cancelled' && !cancelled()
3 changes: 2 additions & 1 deletion .github/workflows/pathogen-repo-build.yaml.in
Original file line number Diff line number Diff line change
Expand Up @@ -303,7 +303,8 @@ jobs:
nextstrain build \
--aws-batch \
--attach "$AWS_BATCH_JOB_ID" \
--no-download
--no-download \
.

# Wait for up to another 6 hours (hours 6–12) if the preceding wait-N job
# timed out. Our heuristic for job timeout is when the job is cancelled but
Expand Down

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