Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add automation for public build #13

Merged
merged 13 commits into from
Sep 28, 2024
Merged

Add automation for public build #13

merged 13 commits into from
Sep 28, 2024

Commits on Sep 28, 2024

  1. Copy .github dir from lassa

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    091e147 View commit details
    Browse the repository at this point in the history

  2. Replace lassa with wnv

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    b045e89 View commit details
    Browse the repository at this point in the history

  3. Organize the build-configs folder to match pathogen repo guide

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    68223a2 View commit details
    Browse the repository at this point in the history

  4. Update s3 upload files and destination

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    9bd0b8d View commit details
    Browse the repository at this point in the history

  5. Use scripts but replace with vendored

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    86c1260 View commit details
    Browse the repository at this point in the history

  6. Copy phylogenetic/build-configs from pathogen repo guide

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    481ee2e View commit details
    Browse the repository at this point in the history

  7. Allow custom rules in phylogenetic workflow

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    b962c13 View commit details
    Browse the repository at this point in the history

  8. Add example data for phylogenetic CI

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    69c3714 View commit details
    Browse the repository at this point in the history

  9. Link example data for CI run

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    7e241bb View commit details
    Browse the repository at this point in the history

  10. Ignore RAxML log files

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    5436bcf View commit details
    Browse the repository at this point in the history

  11. Copy upload phylogenetic dataset from lassa

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    2fc35a1 View commit details
    Browse the repository at this point in the history

  12. Stage WNV phylogenetic datasets until SME can check results

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    b27d088 View commit details
    Browse the repository at this point in the history

  13. Drop serotype annotation from filenames

    @j23414
    j23414 committed Sep 28, 2024
    Configuration menu
    Copy the full SHA
    a146a3e View commit details
    Browse the repository at this point in the history