Register subparsers recursively #2881

Job	Run time
mypy	49s
check-docs	37s
pathogen-repo-ci (dengue)	2m 52s
pathogen-repo-ci-v0 (avian-flu)	59s
pathogen-repo-ci (lassa)	39s
pathogen-repo-ci-v0 (ebola)	51s
pyright	15s
pathogen-repo-ci (measles)	52s
test (python=3.8 biopython=1.80)	11m 25s
pathogen-repo-ci-v0 (mumps)	52s
pathogen-repo-ci (mpox)	1m 15s
test (python=3.8 biopython=latest)	11m 32s
pathogen-repo-ci-v0 (ncov)	1m 6s
pathogen-repo-ci (seasonal-cov)	1m 41s
pathogen-repo-ci-v0 (rsv)	8m 43s
test (python=3.9 biopython=1.80)	11m 41s
pathogen-repo-ci (zika)	1m 2s
pathogen-repo-ci-v0 (seasonal-flu)	1m 13s
test (python=3.9 biopython=latest)	11m 42s
pathogen-repo-ci-v0 (tb)	1m 13s
test (python=3.10 biopython=1.80)	11m 42s
test (python=3.10 biopython=latest)	11m 44s
test (python=3.11 biopython=1.80)	11m 41s
test (python=3.11 biopython=latest)	11m 42s
build-docs / build-conda	0s
build-docs / build-pip	1m 55s
release	0s
codecov	0s
rebuild-docker-image	0s
	2h 0m 3s

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