phylogenetic: Update Auspice configs to include genbank_accession

Include the `genbank_accession` as a separate field in the exported metadata so that it can be searched in the Auspice filter input and so Auspice automatically generates a URL for the GenBank accession.
nextstrain · Apr 15, 2024 · 9b9d1b2 · 9b9d1b2
1 parent c6a0f3a
commit 9b9d1b2
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Showing 5 changed files with 16 additions and 1 deletion.
diff --git a/phylogenetic/config/auspice_config_all.json b/phylogenetic/config/auspice_config_all.json
@@ -3,7 +3,7 @@
   "maintainers": [
     {"name": "Trevor Bedford", "url": "http://bedford.io/team/trevor-bedford/"}
   ],
-  "build_url": "https://github.com/nextstrain/dengue",  
+  "build_url": "https://github.com/nextstrain/dengue",
   "colorings": [
     {
       "key": "gt",
@@ -44,5 +44,8 @@
     "country",
     "region",
     "author"
+  ],
+  "metadata_columns": [
+    "genbank_accession"
   ]
 }
diff --git a/phylogenetic/config/auspice_config_denv1.json b/phylogenetic/config/auspice_config_denv1.json
@@ -43,5 +43,8 @@
     "country",
     "region",
     "author"
+  ],
+  "metadata_columns": [
+    "genbank_accession"
   ]
 }
diff --git a/phylogenetic/config/auspice_config_denv2.json b/phylogenetic/config/auspice_config_denv2.json
@@ -43,5 +43,8 @@
     "country",
     "region",
     "author"
+  ],
+  "metadata_columns": [
+    "genbank_accession"
   ]
 }
diff --git a/phylogenetic/config/auspice_config_denv3.json b/phylogenetic/config/auspice_config_denv3.json
@@ -43,5 +43,8 @@
     "country",
     "region",
     "author"
+  ],
+  "metadata_columns": [
+    "genbank_accession"
   ]
 }
diff --git a/phylogenetic/config/auspice_config_denv4.json b/phylogenetic/config/auspice_config_denv4.json
@@ -43,5 +43,8 @@
     "country",
     "region",
     "author"
+  ],
+  "metadata_columns": [
+    "genbank_accession"
   ]
 }