Initial release of nf-core/multiplesequencealign.
Added
- Collection of input file statistics (percentage similarity, number and length of sequences, PLDDT)
- Guide tree rendering (CLUSTALO_GUIDETREE, FAMSA_GUIDETREE)
- Alignment (CLUSTALO, FAMSA, KALIGN, LEARNMSA, MAFFT, MAGUS, MUSCLE5, TCOFFEE, REGRESSIVE, UPP, 3DCOFFEE, MTMALIGN, FOLDMANSON)
- Computation of the consensus alignment (M-COFFEE)
- Evaluation of the alignments (TC,SP,TCS,iRMSD,#GAPS)
- Report generation (MultiQC, Shiny App)
Contributed by: @luisas @JoseEspinosa @lrauschning @alessiovignoli @mirpedrol @maxulysse
Contributors
maxulysse, JoseEspinosa, and 4 other contributors