Factor out umi handling #3202

Job	Run time
Check for changes	17s
Run tests (tests/default.nf.test docker NF-24.04.2)	4m 52s
Run tests (tests/remove_ribo_rna.nf.test docker NF-24.04.2)	4m 52s
Run tests (tests/salmon.nf.test docker NF-24.04.2)	4m 53s
Run tests (tests/kallisto.nf.test docker NF-24.04.2)	4m 53s
Run tests (tests/skip_trimming.nf.test docker NF-24.04.2)	4m 50s
Run tests (tests/umi.nf.test docker NF-24.04.2)	4m 52s
Run tests (tests/hisat2.nf.test docker NF-24.04.2)	5m 15s
Run tests (tests/star_rsem.nf.test docker NF-24.04.2)	4m 55s
Run tests (tests/min_mapped_reads.nf.test docker NF-24.04.2)	5m 1s
Run tests (tests/featurecounts_group_type.nf.test docker NF-24.04.2)	4m 52s
Run tests (tests/skip_qc.nf.test docker NF-24.04.2)	4m 51s
Run tests (tests/default.nf.test docker NF-latest-everything)	4m 51s
Run tests (tests/remove_ribo_rna.nf.test docker NF-latest-everything)	4m 51s
Run tests (tests/salmon.nf.test docker NF-latest-everything)	4m 51s
Run tests (tests/kallisto.nf.test docker NF-latest-everything)	4m 56s
Run tests (tests/skip_trimming.nf.test docker NF-latest-everything)	4m 54s
Run tests (tests/umi.nf.test docker NF-latest-everything)	4m 51s
Run tests (tests/hisat2.nf.test docker NF-latest-everything)	4m 55s
Run tests (tests/star_rsem.nf.test docker NF-latest-everything)	4m 54s
Run tests (tests/min_mapped_reads.nf.test docker NF-latest-everything)	4m 50s
Run tests (tests/featurecounts_group_type.nf.test docker NF-latest-everything)	4m 49s
Run tests (tests/skip_qc.nf.test docker NF-latest-everything)	4m 49s
confirm-pass	1s
	1h 47m 55s

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