FIX: Pass sbref files to SyN workflow

nipreps · Jul 30, 2023 · fb8e07a · fb8e07a
1 parent b5619db
commit fb8e07a
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/fmriprep/workflows/base.py b/fmriprep/workflows/base.py
@@ -563,8 +563,8 @@ def init_single_subject_wf(subject_id: str):
         elif estimator.method == fm.EstimatorType.ANAT:
             from sdcflows.workflows.fit.syn import init_syn_preprocessing_wf
 
-            sources = [str(s.path) for s in estimator.sources if s.suffix == "bold"]
-            source_meta = [s.metadata for s in estimator.sources if s.suffix == "bold"]
+            sources = [str(s.path) for s in estimator.sources if s.suffix in ("bold", "sbref")]
+            source_meta = [s.metadata for s in estimator.sources if s.suffix in ("bold", "sbref")]
             syn_preprocessing_wf = init_syn_preprocessing_wf(
                 omp_nthreads=config.nipype.omp_nthreads,
                 debug=config.execution.sloppy,