0.1.5

• Updated function docs
• Updated vignettes to include new AllInfo + Incomplete (zipped) format, and additional arguments for rm-ing tmp files etc.
• Changed 'sh' to 'bash' for platform compatibility
• Fixed non-specific string matching in InfoPerLongRead bc it was messing up SRA file processing
• Fixed readID-extraction in GetBarcodes() to allow for non-standard file format e.g. SRA
• DiffSplicingAnalysis with 'Exon' option now done w exon string, not index
• Absolute path instead of pwd for MMalign
• tri heatmap viz generalized for exons
• Exon counting was messed up because of an "&&" call and type issue within R

v0.1.4

• multithreaded writing instead of appending for exonQuant
• minor changes to reflect downstream case sensitive function
• "&" taken out of minimap script to make it unix friendly

v0.1.3

Pushing new version

v.0.1.2

Newest changes to package

- Updated ExonQuant script to make it more memory efficient
- Deleted unwanted files
- Fixed ggplot dependency issues