added unit test for log likelihood with clusters #1514
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| # This workflow uses actions that are not certified by GitHub. | |
| # They are provided by a third-party and are governed by | |
| # separate terms of service, privacy policy, and support | |
| # documentation. | |
| # | |
| # See https://github.com/r-lib/actions/tree/master/examples#readme for | |
| # additional example workflows available for the R community. | |
| # ======================================================== # | |
| # Determines when the action is triggered # | |
| # ======================================================== # | |
| on: [push, pull_request] | |
| name: linter | |
| # ======================================================== # | |
| # Determine actions to take # | |
| # ======================================================== # | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checking out the repository | |
| uses: actions/checkout@v3 | |
| - name: Setting up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: Installing dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::lintr, local::. | |
| needs: lint | |
| - name: Picking on the coding style | |
| run: | | |
| library(lintr) | |
| excluded_files <- list( | |
| "inst", | |
| "data-raw", | |
| "tests/testthat.R", | |
| "tests", | |
| "vignettes-raw", | |
| "R/RcppExports.R", | |
| "vignettes/parallel_chains.Rmd", | |
| "work-docs", | |
| "vignettes/SMC-Mallows.Rmd" = 19 | |
| ) | |
| style_rules <- list( | |
| absolute_path_linter(), assignment_linter(), brace_linter(), | |
| commas_linter(), commented_code_linter(), | |
| equals_na_linter(), function_left_parentheses_linter(), | |
| infix_spaces_linter(), whitespace_linter(), | |
| nonportable_path_linter(), | |
| pipe_continuation_linter(), seq_linter(), quotes_linter(), | |
| spaces_inside_linter(), spaces_left_parentheses_linter(), | |
| T_and_F_symbol_linter(), todo_comment_linter(), | |
| trailing_blank_lines_linter(), trailing_whitespace_linter(), | |
| undesirable_function_linter(), | |
| unnecessary_concatenation_linter() | |
| ) | |
| lint_package(linters = style_rules, exclusions = excluded_files) | |
| shell: Rscript {0} | |
| env: | |
| LINTR_ERROR_ON_LINT: true |