filter out cases with no sequencing

oicr-gsi · Oct 9, 2024 · 9e2ff4e · 9e2ff4e
1 parent 2e852b9
commit 9e2ff4e
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/cardea-server/src/main/java/ca/on/oicr/gsi/cardea/server/service/CaseService.java b/cardea-server/src/main/java/ca/on/oicr/gsi/cardea/server/service/CaseService.java
@@ -127,6 +127,7 @@ public Set<ShesmuCase> getShesmuCases() {
 
   public Set<ShesmuDetailedCase> getShesmuDetailedCases() {
     return caseData.getCases().stream()
+            .filter(kase -> !getSequencingForShesmuCase(kase).isEmpty())
             .map(kase -> convertCaseToShesmuDetailedCase(kase))
             .collect(Collectors.toSet());
   }