Update citations #313
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| # The purpose of this action is to test that the bioconda recipe can be built | |
| # To this end it uses the recipe in `.conda/meta.yaml` which should be kept in sync | |
| # with the bioconda recipe (i.e. modify dependencies on bioconda if you need | |
| # to modify the dependencies of `.conda/meta.yaml` to make the tests pass. ) | |
| name: conda | |
| on: | |
| push: | |
| branches: [master] | |
| pull_request: | |
| branches: [master] | |
| jobs: | |
| tests: | |
| runs-on: ${{ matrix.os }} | |
| name: conda ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Setup Minoconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-update-conda: true | |
| miniforge-version: latest | |
| use-mamba: true | |
| channels: conda-forge,bioconda | |
| channel-priority: true | |
| python-version: 3.8 | |
| - name: Set-up channels and install conda build | |
| run: | | |
| mamba install -y conda-build conda-verify boa | |
| shell: bash | |
| - name: build and test package | |
| run: | | |
| cd .conda | |
| mamba build . --no-anaconda-upload | |
| shell: bash |