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ModuleNotFoundError: No module named 'pykwalify' #211

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RajeshRavi-brcm opened this issue Apr 13, 2020 · 21 comments
Closed

ModuleNotFoundError: No module named 'pykwalify' #211

RajeshRavi-brcm opened this issue Apr 13, 2020 · 21 comments

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@RajeshRavi-brcm
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We are building Zephyr RTOS using yocto. The latest version has dependency

on the python package known as "pykwalify".

When compiled, I get following error from zephyr:

| ModuleNotFoundError: No module named 'pykwalify'

I think the pykwalify package recipe needs to be added for successful compilation.

I don't find pykwalify Yocoto recipe anywhere.

Please correct me if I'm wrong.Or please point me to pykwalify recipe, if it already exists.

Thanks & Regards,
Rajesh

@kraj
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kraj commented Apr 13, 2020

check https://layers.openembedded.org/ and if this is not there then perhaps you need to write one

@Abhishek-brcm
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Abhishek-brcm commented Apr 13, 2020

@kraj, I have added below recipe for 'pykwalify':
meta-python/recipes-devtools/python/python3-pykwalify_1.7.0.bb:

SUMMARY = "YAML/JSON validation library"
HOMEPAGE = "https://pypi.org/project/pykwalify/"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://LICENSE;md5=a72ea5159364a2cd7f45c6dcbee37872"

SRC_URI[md5sum] = "58357f1d0f77de976e73dbd3660af75b"
SRC_URI[sha256sum] = "7e8b39c5a3a10bc176682b3bd9a7422c39ca247482df198b402e8015defcceb2"

PYPI_PACKAGE = "pykwalify"
inherit setuptools3 pypi

DEPENDS = "\
    python3-dateutil-native \
    python3-pyyaml-native \
"

RDEPENDS_${PN} = "\
    ${PYTHON_PN}-dateutil \
    ${PYTHON_PN}-pyyaml \
"

BBCLASSEXTEND = "native"

This recipe works fine. i.e. 'pykwalify' compile goes thorugh.

However, I see below issue during runtime as dateutil has runtime dependency on six package:

|     File "poky/build/tmp/work/*/gitAUTOINC+4bf8ed68c6_bfa48a337e_7d28a5ccba_e6c97bbc82_90d93a11ba_84cce07469_5ba575618e-r0/recipe-sysroot-native/usr/lib/python3.8/site-packages/pykwalify/core.py", line 25, in <module>
|       from dateutil.parser import parse
|     File "poky/build/tmp/work/*/gitAUTOINC+4bf8ed68c6_bfa48a337e_7d28a5ccba_e6c97bbc82_90d93a11ba_84cce07469_5ba575618e-r0/recipe-sysroot-native/usr/lib/python3.8/site-packages/dateutil/parser/__init__.py", line 2, in <module>
|       from ._parser import parse, parser, parserinfo, ParserError
|     File "poky/build/tmp/work/*/gitAUTOINC+4bf8ed68c6_bfa48a337e_7d28a5ccba_e6c97bbc82_90d93a11ba_84cce07469_5ba575618e-r0/recipe-sysroot-native/usr/lib/python3.8/site-packages/dateutil/parser/_parser.py", line 42, in <module>
|       import six
|
|   ModuleNotFoundError: No module named 'six'

This issue is not seen when I add below:

diff --git a/meta-python/recipes-devtools/python/python-dateutil.inc b/meta-python/recipes-devtools/python/python-dateutil.inc
index 3c89cd62c..e5f945315 100644
--- a/meta-python/recipes-devtools/python/python-dateutil.inc
+++ b/meta-python/recipes-devtools/python/python-dateutil.inc
@@ -15,6 +15,9 @@ FILES_${PN}-zoneinfo = "${libdir}/${PYTHON_DIR}/site-packages/dateutil/zoneinfo"

 DEPENDS += "${PYTHON_PN}-setuptools-scm-native"

+RDEPENDS_${PN} = "\
+    ${PYTHON_PN}-six \
+"
 RDEPENDS_${PN}_class-target = "\
     ${PYTHON_PN}-datetime \
     ${PYTHON_PN}-numbers \

${PYTHON_PN}-six is already added under RDEPENDS_${PN}_class-target. I am not sure how is that different from RDEPENDS_${PN} as used in patch above. Can you please point to right direction here?

@kraj
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kraj commented Apr 13, 2020

this seems ok. if you add it to RDEPENDS_${PN} then it also shows as rdep in native and nativesdk recipes, where as RDEPENDS_${PN}_class-target is only added for target recipe. It seems its needed for native and nativesdk versions too. In that case, what you have is fine but also remove it from RDEPENDS_${PN}_class-target so its not duplicated.

@RajeshRavi-brcm
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RajeshRavi-brcm commented Apr 14, 2020

Following are the final working recipe and dependency patch from Abhishek:

A)diff --git a/meta-python/recipes-devtools/python/python-dateutil.inc b/meta-python/recipes-devtools/python/python-dateutil.inc
index 3c89cd6..40f406f 100644
--- a/meta-python/recipes-devtools/python/python-dateutil.inc
+++ b/meta-python/recipes-devtools/python/python-dateutil.inc
@@ -15,10 +15,13 @@

DEPENDS += "${PYTHON_PN}-setuptools-scm-native"

+RDEPENDS_${PN} = "\

  • ${PYTHON_PN}-six
    +"

RDEPENDS_${PN}_class-target = "
${PYTHON_PN}-datetime
${PYTHON_PN}-numbers \

  • ${PYTHON_PN}-six
    ${PYTHON_PN}-stringold \

meta-openembedded/meta-python/recipes-devtools/python/python3-pykwalify_1.7.0.bb:
B)

SUMMARY = "YAML/JSON validation library"
DESCRIPTION = "pykwalify is a schema validator for YAML and JSON"
HOMEPAGE = "https://pypi.org/project/pykwalify/"
LICENSE = "MIT"
LIC_FILES_CHKSUM = "file://LICENSE;md5=a72ea5159364a2cd7f45c6dcbee37872"

SRC_URI[md5sum] = "58357f1d0f77de976e73dbd3660af75b"
SRC_URI[sha256sum] = "7e8b39c5a3a10bc176682b3bd9a7422c39ca247482df198b402e8015defcceb2"

PYPI_PACKAGE = "pykwalify"
inherit setuptools3 pypi

DEPENDS = "
${PYTHON_PN}-dateutil-native
${PYTHON_PN}-pyyaml-native
"

RDEPENDS_${PN} = "
${PYTHON_PN}-dateutil
${PYTHON_PN}-pyyaml
"

BBCLASSEXTEND = "native"

@RajeshRavi-brcm
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RajeshRavi-brcm commented Apr 14, 2020

Hi Abhishek,
Do you want to add more to this or can we close this issue.

Regards,
Rajesh

@Abhishek-brcm
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@RajeshRavi-brcm , want to keep this issue open until these patches are merged.

@kraj
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kraj commented Apr 14, 2020

Prepare a proper patch and send either pull request or mail it to oe mailing list.

@Abhishek-brcm
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@kraj I have send in proper patches via "openembedded-devel@lists.openembedded.org".

@kraj
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kraj commented Apr 14, 2020

thanks

@Abhishek-brcm
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@kraj Are these patches merged?
Through internal review, we found that DEPENDS may not be necessary for pykwalify. I am verifying the same. Only RDEPENDS is needed.
If not already merged, I can send v2; otherwise I will send separate patch to fix this. Please let me know.

@kraj
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kraj commented Apr 14, 2020

No they are in master-next please send V2

@Abhishek-brcm
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Submitted v2.

they are in master-next please send V2

Does that mean you will need to revert the patch from master-next?

@kraj
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kraj commented Apr 15, 2020

yes thats normal, master-next is meant for integrating patches, so please fix and resend.

@Abhishek-brcm
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Abhishek-brcm commented Apr 15, 2020

Following error is seen by yocto autobuild with v2 patches:

ModuleNotFoundError: No module named '_sysconfigdata'

Log: http://errors.yoctoproject.org/Errors/Details/403673/
Here is the corresponding ongoing discussion on the list: https://lists.openembedded.org/g/openembedded-devel/topic/73017199

@kraj , I have created patches by referring to other recipes in the meta-python directory. I have very limited knowledge on python and yocto. Additionally, I am not able to reproduce this issue locally. In my build setup, 'pykwalify' build goes through and I am able to use it in zephyr python scripts as well. It would be great if yocto/python expert can help us on this issue to resolve it properly and quickly..

@Abhishek-brcm
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@kraj , can you please help with this issue?

@kraj
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kraj commented Apr 16, 2020

perhaps you need something like

    if '_PYTHON_SYSCONFIGDATA_NAME' in os.environ:
        del os.environ['_PYTHON_SYSCONFIGDATA_NAME']

in do_compile maybe

@Abhishek-brcm
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@kraj I don't see any of the other python3 recipe using this. Also as I mentioned in earlier comment, I am not able to reproduce this issue in my local build machine(Ubuntu 18.04).
If you could share how to reproduce this issue, then I can try the fix suggested above and see if it resolves the issue.

@Abhishek-brcm
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@kraj I have pushed v3 with suggested fix (I did unset _PYTHON_SYSCONFIGDATA_NAME in the recipe inspired from some example in meta/ directory). Let me know if that solves the issue:
v3: https://lists.openembedded.org/g/openembedded-devel/message/83970 and
https://lists.openembedded.org/g/openembedded-devel/message/83971

@Abhishek-brcm
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@kraj Any updates?

@kraj
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kraj commented Apr 18, 2020

merged with 1f2c4c2

@kraj kraj closed this as completed Apr 18, 2020
@Abhishek-brcm
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@kraj , Thanks.

kraj pushed a commit to YoeDistro/meta-openembedded that referenced this issue Jul 5, 2021
0.18.0, 2021-06-28
 * Fix openembedded#209 Update freeze recurse into pyrsistent data structures and thaw to recurse into lists and dicts,
   Thanks @phil-arh for this!
   NB! This is a backwards incompatible change! To keep the old behaviour pass `strict=False` to freeze and thaw.
 * Fix openembedded#226, stop using deprecated exception.message. Thanks @hexagonrecursion for this!
 * Fix openembedded#211, add union operator to persistent maps. Thanks @bowbahdoe for this!
 * Fix openembedded#194, declare build dependencies through pyproject.toml. Thanks @jaraco for this!
 * Officially drop Python 3.5 support.
 * Fix openembedded#223, release wheels for all major platforms. Thanks @johnthagen for helping out with this!
 * Fix openembedded#221, KeyError obscured by TypeError if key is a tuple. Thanks @ganwell for this!
 * Fix LICENSE file name spelling. Thanks @ndowens and @barentsen for this!
 * Fix openembedded#216, add abstractmethod decorator for CheckedType and ABCMeta for _CheckedTypeMeta. Thanks @ss18 for this!
 * Fix openembedded#228, rename example classes in tests to avoid name clashes with pytest.

-License-Update: Copyright year updated to 2021.

Signed-off-by: Zang Ruochen <zangrc.fnst@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
halstead pushed a commit that referenced this issue Jul 6, 2021
0.18.0, 2021-06-28
 * Fix #209 Update freeze recurse into pyrsistent data structures and thaw to recurse into lists and dicts,
   Thanks @phil-arh for this!
   NB! This is a backwards incompatible change! To keep the old behaviour pass `strict=False` to freeze and thaw.
 * Fix #226, stop using deprecated exception.message. Thanks @hexagonrecursion for this!
 * Fix #211, add union operator to persistent maps. Thanks @bowbahdoe for this!
 * Fix #194, declare build dependencies through pyproject.toml. Thanks @jaraco for this!
 * Officially drop Python 3.5 support.
 * Fix #223, release wheels for all major platforms. Thanks @johnthagen for helping out with this!
 * Fix #221, KeyError obscured by TypeError if key is a tuple. Thanks @ganwell for this!
 * Fix LICENSE file name spelling. Thanks @ndowens and @barentsen for this!
 * Fix #216, add abstractmethod decorator for CheckedType and ABCMeta for _CheckedTypeMeta. Thanks @ss18 for this!
 * Fix #228, rename example classes in tests to avoid name clashes with pytest.

-License-Update: Copyright year updated to 2021.

Signed-off-by: Zang Ruochen <zangrc.fnst@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
Signed-off-by: Trevor Gamblin <trevor.gamblin@windriver.com>
kraj pushed a commit to YoeDistro/meta-openembedded that referenced this issue Nov 1, 2022
License-Update: Copyright year updated to 2022.

Changelog:
==========
    Dropped support for legacy Pythons (2.7, 3.6 or older).
    Switched CI to GitHub Actions.
    Removed dependency on the py library (that was not properly specified as a dependency anyway).
    Fix skipping test in test_utils.py if appropriate VCS not available. Also fix typo. Contributed by Sam James in openembedded#211.
    Added support for pytest 7.2.0 by using pytest.hookimpl and pytest.hookspec to configure hooks. Contributed by Florian Bruhin in openembedded#224.
    Now no save is attempted if --benchmark-disable is used. Fixes openembedded#205. Contributed by Friedrich Delgado in openembedded#207.

Signed-off-by: Wang Mingyu <wangmy@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
kraj pushed a commit to YoeDistro/meta-openembedded that referenced this issue Nov 2, 2022
License-Update: Copyright year updated to 2022.

Changelog:
==========
    Dropped support for legacy Pythons (2.7, 3.6 or older).
    Switched CI to GitHub Actions.
    Removed dependency on the py library (that was not properly specified as a dependency anyway).
    Fix skipping test in test_utils.py if appropriate VCS not available. Also fix typo. Contributed by Sam James in openembedded#211.
    Added support for pytest 7.2.0 by using pytest.hookimpl and pytest.hookspec to configure hooks. Contributed by Florian Bruhin in openembedded#224.
    Now no save is attempted if --benchmark-disable is used. Fixes openembedded#205. Contributed by Friedrich Delgado in openembedded#207.

Signed-off-by: Wang Mingyu <wangmy@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
kraj pushed a commit to YoeDistro/meta-openembedded that referenced this issue Nov 7, 2022
License-Update: Copyright year updated to 2022.

Changelog:
==========
    Dropped support for legacy Pythons (2.7, 3.6 or older).
    Switched CI to GitHub Actions.
    Removed dependency on the py library (that was not properly specified as a dependency anyway).
    Fix skipping test in test_utils.py if appropriate VCS not available. Also fix typo. Contributed by Sam James in openembedded#211.
    Added support for pytest 7.2.0 by using pytest.hookimpl and pytest.hookspec to configure hooks. Contributed by Florian Bruhin in openembedded#224.
    Now no save is attempted if --benchmark-disable is used. Fixes openembedded#205. Contributed by Friedrich Delgado in openembedded#207.

Signed-off-by: Wang Mingyu <wangmy@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
kraj pushed a commit to YoeDistro/meta-openembedded that referenced this issue Jul 21, 2023
License-Update: Remove unnecessary and incorrect copyright notice.

Changelog:
============
  Set stacklevel=2 in deprecation warning for .text. (openembedded#210)
  Added .permissions attribute. (openembedded#211)
  Require Python 3.8 or later.

Signed-off-by: Wang Mingyu <wangmy@fujitsu.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
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