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Fix flaky test BulkIntegrationIT.testDeleteIndexWhileIndexing #5491

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merged 1 commit into from
Dec 9, 2022

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@Poojita-Raj Poojita-Raj commented Dec 8, 2022

Signed-off-by: Poojita Raj poojiraj@amazon.com

Description

The test BulkIntegrationIT.testDeleteIndexWhileIndexing is failing intermittently whenever a thread that's indexing documents does not terminate in the timeout interval provided by the join method and is still alive failing an assertion (seen in the stacktrace of the linked issue).

9 failures were seen in the last 2 months: (3607,3757,3789,3839,4952,6624,6635,6723,6979)

Issues Resolved

Resolves #5162

Check List

  • New functionality includes testing.
    • All tests pass
  • New functionality has been documented.
    • New functionality has javadoc added
  • Commits are signed per the DCO using --signoff
  • Commit changes are listed out in CHANGELOG.md file (See: Changelog)

By submitting this pull request, I confirm that my contribution is made under the terms of the Apache 2.0 license.
For more information on following Developer Certificate of Origin and signing off your commits, please check here.

Signed-off-by: Poojita Raj <poojiraj@amazon.com>
@Poojita-Raj Poojita-Raj requested review from a team and reta as code owners December 8, 2022 01:13
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There were a couple of approaches that could have been taken with this failing test -

  1. Increasing the timeout period for the thread join call to provide enough time for the thread to terminate. -> The number of failures did not decrease on increasing this value - roughly the same 1 or 2 failures for 100 runs took place.
  2. Setting the timeout period for the join call to infinity just made the test hang indefinitely.
  3. Catching the thread that was still alive after the join call and interrupting it. -> Even after catching the IllegalStateException on the thread, the test would still fail due to the failure of AssertRequestsFinished method (this is in OpenSearchIntegTestCase's afterTest methods called on cleanup) due to the leftover in flight requests to the node.

The purpose of the test was to determine that the index deletion took place even while a simultaneous thread was actively indexing documents into it. Therefore, the change to limit it to 1 indexing thread (instead of a range of 1 to 4) solved the flakiness while preserving the functionality of the test.

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github-actions bot commented Dec 8, 2022

Gradle Check (Jenkins) Run Completed with:

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Codecov Report

Merging #5491 (b6f841e) into main (2416d37) will decrease coverage by 0.01%.
The diff coverage is n/a.

@@             Coverage Diff              @@
##               main    #5491      +/-   ##
============================================
- Coverage     71.05%   71.04%   -0.02%     
+ Complexity    58285    58243      -42     
============================================
  Files          4717     4717              
  Lines        277669   277669              
  Branches      40194    40194              
============================================
- Hits         197300   197259      -41     
- Misses        64245    64269      +24     
- Partials      16124    16141      +17     
Impacted Files Coverage Δ
.../opensearch/search/profile/ProfileShardResult.java 28.57% <0.00%> (-60.72%) ⬇️
...ch/transport/ReceiveTimeoutTransportException.java 50.00% <0.00%> (-50.00%) ⬇️
...ile/aggregation/AggregationProfileShardResult.java 55.55% <0.00%> (-40.75%) ⬇️
...h/action/ingest/SimulateDocumentVerboseResult.java 60.71% <0.00%> (-39.29%) ⬇️
...ava/org/opensearch/search/profile/NetworkTime.java 31.57% <0.00%> (-36.85%) ⬇️
...n/admin/indices/readonly/AddIndexBlockRequest.java 35.71% <0.00%> (-35.72%) ⬇️
...ion/admin/cluster/node/info/PluginsAndModules.java 53.12% <0.00%> (-34.38%) ⬇️
.../search/aggregations/pipeline/HoltLinearModel.java 20.33% <0.00%> (-32.21%) ⬇️
.../search/profile/query/QueryProfileShardResult.java 68.33% <0.00%> (-28.34%) ⬇️
...rc/main/java/org/opensearch/ingest/IngestInfo.java 51.72% <0.00%> (-27.59%) ⬇️
... and 468 more

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@Poojita-Raj : Thanks for this change. 👍

Do you mind explaining why failure was happening and making this change fixes that ?

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@Poojita-Raj : Thanks for this change. 👍

Do you mind explaining why failure was happening and making this change fixes that ?

Sure @dreamer-89,

In the original code, we can see that multiple threads are created to run the block of code that indexes documents into the index. While this indexing is actively taking place, the main thread is deleting the index. All the threads indexing documents have some shared objects, namely, the AtomicInteger docID and the AtomicBoolean stopped.

In the case that we have multiple threads indexing, very occasionally we run into the situation where one thread is left in a WAITING state after it does an Object.wait() on a shared object. It is now waiting for a notify() or a notifyAll() call from the other threads that never takes place since they are now terminated and the waiting thread is left in a waiting state indefinitely, thus failing the assertFalse(thread.isAlive()) assertion.

However, when we only spin up a single thread to index while deleting documents, there is no contention for the shared objects so the thread always terminates, fixing the flakiness of the test. Since, all we want to test is whether we can delete the index while actively indexing documents - one thread suffices for this test.

@dblock dblock merged commit 7108ee5 into opensearch-project:main Dec 9, 2022
@dblock dblock added backport 1.x backport 2.x Backport to 2.x branch labels Dec 9, 2022
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The backport to 1.x failed:

The process '/usr/bin/git' failed with exit code 128

To backport manually, run these commands in your terminal:

# Fetch latest updates from GitHub
git fetch
# Create a new working tree
git worktree add ../.worktrees/backport-1.x 1.x
# Navigate to the new working tree
pushd ../.worktrees/backport-1.x
# Create a new branch
git switch --create backport/backport-5491-to-1.x
# Cherry-pick the merged commit of this pull request and resolve the conflicts
git cherry-pick -x --mainline 1 7108ee5f703a1566efaa55b21d4d10397c38de91
# Push it to GitHub
git push --set-upstream origin backport/backport-5491-to-1.x
# Go back to the original working tree
popd
# Delete the working tree
git worktree remove ../.worktrees/backport-1.x

Then, create a pull request where the base branch is 1.x and the compare/head branch is backport/backport-5491-to-1.x.

opensearch-trigger-bot bot pushed a commit that referenced this pull request Dec 9, 2022
Signed-off-by: Poojita Raj <poojiraj@amazon.com>

Signed-off-by: Poojita Raj <poojiraj@amazon.com>
(cherry picked from commit 7108ee5)
Signed-off-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
tlfeng pushed a commit that referenced this pull request Dec 12, 2022
…#5506)

Signed-off-by: Poojita Raj <poojiraj@amazon.com>
(cherry picked from commit 7108ee5)
@tlfeng tlfeng added the :test Adding or fixing a test label Dec 12, 2022
ryanbogan pushed a commit that referenced this pull request Dec 13, 2022
Signed-off-by: Poojita Raj <poojiraj@amazon.com>

Signed-off-by: Poojita Raj <poojiraj@amazon.com>
saratvemulapalli pushed a commit that referenced this pull request Dec 15, 2022
…ature/identity (#5581)

* Fix flaky ShardIndexingPressureConcurrentExecutionTests (#5439)

Add conditional check on assertNull to fix flaky tests.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Fix bwc for cluster manager throttling settings (#5305)

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* Update ingest-attachment plugin dependencies: Apache Tika 3.6.0, Apache Mime4j 0.8.8, Apache Poi 5.2.3, Apache PdfBox 2.0.27 (#5448)

Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

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* Enhance CheckpointState to support no-op replication (#5282)

* CheckpointState enhanced to support no-op replication

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Co-authored-by: Bukhtawar Khan<bukhtawa@amazon.com>

* [BUG] org.opensearch.repositories.s3.RepositoryS3ClientYamlTestSuiteIT/test {yaml=repository_s3/20_repository_permanent_credentials/Snapshot and Restore with repository-s3 using permanent credentials} flaky: randomizing basePath (#5482)

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Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

* [Bug] fix case sensitivity for wildcard queries (#5462)

Fixes the wildcard query to not normalize the pattern when case_insensitive is
set by the user. This is achieved by creating a new normalizedWildcardQuery
method so that query_string queries (which do not support case sensitivity) can
still normalize the pattern when the default analyzer is used; maintaining
existing behavior.

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Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

* Revert "build no-jdk distributions as part of release build (#4902)" (#5465)

This reverts commit 8c9ca4e.

It seems that this wasn't entirely the correct way and is currently
blocking us from removing the `build.sh` from the `opensearch-build`
repository (i.e. this `build.sh` here is not yet being used).
See the discussion in opensearch-project/opensearch-build#2835 for
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Signed-off-by: Daniel (dB.) Doubrovkine <dblock@amazon.com>

* Added jackson dependency to server (#5366)

* Added jackson dependency to server

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Updated CHANGELOG

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* Update build.gradle files

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* Add RuntimePermission to fix errors

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* Fix flaky test BulkIntegrationIT.testDeleteIndexWhileIndexing (#5491)

Signed-off-by: Poojita Raj <poojiraj@amazon.com>

Signed-off-by: Poojita Raj <poojiraj@amazon.com>

* Add release notes for 2.4.1 (#5488)

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Signed-off-by: Xue Zhou <xuezhou@amazon.com>

* Properly skip OnDemandBlockSnapshotIndexInputTests.testVariousBlockSize on Windows. (#5511)

PR #5397 skipped this test in @before block but still
frequently throws a TestCouldNotBeSkippedException.  This is caused by the after block still executing and throwing  an exception
while cleaning the directory created at the path in @before.  Moving the assumption to the individual test prevents this exception by ensuring the path exists.

Signed-off-by: Marc Handalian <handalm@amazon.com>

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* Merge first batch of feature/extensions into main

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* Fixed CHANGELOG

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* Fixed newline errors

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* Renaming and CHANGELOG fixes

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* Refactor extension loading into private method

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* Removed skipValidation and added connectToExtensionNode method

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* Remove unnecessary feature flag calls

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* Removed unnecessary validateSettingKey call

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* Fix azure-core dependency

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* Update SHAs

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* Remove unintended dependency changes

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* Removed dynamic settings regitration, removed info() method, and added NoopExtensionsManager

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* Add javadoc

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* Fixed spotless failure

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* Removed NoopExtensionsManager

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* Added functioning NoopExtensionsManager

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* Added missing javadoc

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* Remove forbiddenAPI

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* Fix spotless

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* Change logger.info to logger.error in handleException

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Fix ExtensionsManagerTests

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Removing unrelated change

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Update SHAs

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Bump commons-compress from 1.21 to 1.22 (#5520)

Bumps commons-compress from 1.21 to 1.22.

---
updated-dependencies:
- dependency-name: org.apache.commons:commons-compress
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* [Segment Replication] Trigger a round of replication for replica shards during peer recovery when segment replication is enabled (#5332)

* Fix new added replica shards falling behind primary.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Trigger a round of replication during peer recovery when segment replication is enabled.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Remove unnecessary start replication overloaded method.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Add test for failure case and refactor some code.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Apply spotless check.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Addressing comments on the PR.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Remove unnecessary condition check.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Apply spotless check.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Add step listeners to resolve forcing round of segment replication.

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

Signed-off-by: Rishikesh1159 <rishireddy1159@gmail.com>

* Adding support to register settings dynamically (#5495)

* Adding support to register settings dynamically

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Update CHANGELOG

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Removed unnecessary registerSetting methods

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Change setting registration order

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Add unregisterSettings method

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Remove unnecessary feature flag

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

Signed-off-by: Ryan Bogan <rbogan@amazon.com>

* Updated 1.3.7 release notes date (#5536)

Signed-off-by: owaiskazi19 <owaiskazi19@gmail.com>

Signed-off-by: owaiskazi19 <owaiskazi19@gmail.com>

* Pre conditions check before updating weighted routing metadata (#4955)

* Pre conditions check to allow weight updates for non decommissioned attribute

Signed-off-by: Rishab Nahata <rnnahata@amazon.com>

* Atomically update cluster state with decommission status and corresponding action (#5093)

* Atomically update the cluster state with decommission status and its corresponding action in the same execute call

Signed-off-by: Rishab Nahata <rnnahata@amazon.com>

* Update Netty to 4.1.86.Final (#5529)

Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

* Update release date in 2.4.1 release notes (#5549)

Signed-off-by: Suraj Singh <surajrider@gmail.com>

Signed-off-by: Suraj Singh <surajrider@gmail.com>

* Update 2.4.1 release notes (#5552)

Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

Signed-off-by: Andriy Redko <andriy.redko@aiven.io>

* Refactor fuzziness interface on query builders (#5433)

* Refactor Object to Fuzziness type for all query builders

Signed-off-by: noCharger <lingzhichu.clz@gmail.com>

* Revise on bwc

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* Update change log

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* Upgrade lucene version (#5570)

* Added bwc version 2.4.2

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* Added 2.4.2.

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* Update Lucene snapshot to 9.5.0-snapshot-d5cef1c

Signed-off-by: Suraj Singh <surajrider@gmail.com>

* Update changelog entry

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* Add 2.4.2 bwc version

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* Internal changes post lucene upgrade

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* Add CI bundle pattern to distribution download (#5348)

* Add CI bundle pattern for ivy repo

Signed-off-by: Zelin Hao <zelinhao@amazon.com>

* Gradle update

Signed-off-by: Zelin Hao <zelinhao@amazon.com>

* Extract path

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* Change with customDistributionDownloadType

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* Add default for exception handle

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* Add documentations

Signed-off-by: Zelin Hao <zelinhao@amazon.com>

Signed-off-by: Zelin Hao <zelinhao@amazon.com>

* Bump protobuf-java from 3.21.9 to 3.21.11 in /plugins/repository-hdfs (#5519)

* Bump protobuf-java from 3.21.9 to 3.21.11 in /plugins/repository-hdfs

Bumps [protobuf-java](https://github.com/protocolbuffers/protobuf) from 3.21.9 to 3.21.11.
- [Release notes](https://github.com/protocolbuffers/protobuf/releases)
- [Changelog](https://github.com/protocolbuffers/protobuf/blob/main/generate_changelog.py)
- [Commits](protocolbuffers/protobuf@v3.21.9...v3.21.11)

---
updated-dependencies:
- dependency-name: com.google.protobuf:protobuf-java
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

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* Updating SHAs

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[BUG] org.opensearch.action.bulk.BulkIntegrationIT.testDeleteIndexWhileIndexing flaky
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